RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 RNF212BA8MTL3 300 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 THBS3P49746 956 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 RAB32Q13637 225 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 FAM120AOSQ5T036 256 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 LRTM2Q8N967 370 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 TCTEX1D2Q8WW35 142 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 GALNT14Q96FL9 552 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 SMIM8Q96KF7 97 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 NABP2Q9BQ15 211 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 AIFM2Q9BRQ8 373 aa14.34□□□□□ -0.11
CCDC78-201ENST00000293889 A0A0U1RQK1 487 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 A0A1W2PPI3 338 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 OR5AC1P0C628 307 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 ATF4P18848 351 aaPredicted RBP14.33□□□□□ -0.11
CCDC78-201ENST00000293889 BRWD1-AS2P59051 145 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 CATR1Q13166 79 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 SP6Q3SY56 376 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.11
CCDC78-201ENST00000293889 IL17RELQ6ZVW7 336 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 DDB2Q92466 427 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 ADTRPQ96IZ2 230 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 TP53RKQ96S44 253 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 NKX6-2Q9C056 277 aaPredicted RBP14.33□□□□□ -0.11
CCDC78-201ENST00000293889 TMEM160Q9NX00 188 aa14.33□□□□□ -0.11
CCDC78-201ENST00000293889 NIPBLQ6KC79 2804 aaeCLIP14.33□□□□□ -0.12
CCDC78-201ENST00000293889 OOSP1A8MZH6 123 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 TXNL1O43396 289 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 BPIFB3P59826 476 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 OR2B11Q5JQS5 317 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 MOB3BQ86TA1 216 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 RBMXL1Q96E39 390 aaKnown RBP14.33□□□□□ -0.12
CCDC78-201ENST00000293889 KCNIP3Q9Y2W7 256 aa14.33□□□□□ -0.12
CCDC78-201ENST00000293889 H0Y980 276 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 H0YJW9 148 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 HKR1P10072 659 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 PJVKQ0ZLH3 352 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 CLRN3Q8NCR9 226 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 OR5AN1Q8NGI8 311 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 LIN7CQ9NUP9 197 aaKnown RBP14.32□□□□□ -0.12
CCDC78-201ENST00000293889 PRR13Q9NZ81 148 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 PRELID3BQ9Y3B1 194 aa14.32□□□□□ -0.12
CCDC78-201ENST00000293889 IGHV3-72A0A0B4J1Y9 119 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 TIMM23O14925 209 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 RAMP3O60896 148 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 TMEM268Q5VZI3 342 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 CCDC144NLQ6NUI1 221 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 SPAG16Q8N0X2 631 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 BCL6BQ8N143 479 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-201ENST00000293889 SVBPQ8N300 66 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 TEX29Q8N6K0 151 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 GLYATL2Q8WU03 294 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 MXRA5Q9NR99 2828 aa14.31□□□□□ -0.12
CCDC78-201ENST00000293889 SETD2Q9BYW2 2564 aaPredicted RBP14.31□□□□□ -0.12
CCDC78-201ENST00000293889 FCGR3BO75015 233 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 DEDDO75618 318 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 TMEM187Q14656 261 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 ZNF585BQ52M93 769 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 CFHR4Q92496 578 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 TMEM222Q9H0R3 208 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 ARV1Q9H2C2 271 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 PLEKHA2Q9HB19 425 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 SLC35D1Q9NTN3 355 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 ZFP57Q9NU63 452 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 FAM96BQ9Y3D0 163 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 POMT1Q9Y6A1 747 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 KCNAB3O43448 404 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 IFNA21P01568 189 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 APOA2P02652 100 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 UCP1P25874 307 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 SULT1A2P50226 295 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 DEFA5Q01523 94 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 C9orf139Q6ZV77 190 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 TCTEX1D1Q8N7M0 179 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 TMED6Q8WW62 240 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 C22orf15Q8WYQ4 148 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 SEC11CQ9BY50 192 aa14.3□□□□□ -0.12
CCDC78-201ENST00000293889 SERPINE2P07093 398 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 HOXB5P09067 269 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 MC5RP33032 325 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 KIR2DS2P43631 304 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 LPAR6P43657 344 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 BLOC1S1P78537 153 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 HABP2Q14520 560 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-201ENST00000293889 RTL8BQ17RB0 113 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 IAH1Q2TAA2 248 aaPredicted RBP14.29□□□□□ -0.12
CCDC78-201ENST00000293889 GGNBP1Q5YKI7 109 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 LYPD6BQ8NI32 183 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 CD300LFQ8TDQ1 290 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 MEGF9Q9H1U4 602 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 ZC4H2Q9NQZ6 224 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 WASHC3Q9Y3C0 194 aa14.29□□□□□ -0.12
CCDC78-201ENST00000293889 NAV3Q8IVL0 2385 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 ZFHX3Q15911 3703 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 NF1P21359 2839 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 H7C2Y5 167 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 RBFOX2O43251 390 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC78-201ENST00000293889 CRLF1O75462 422 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 JTBO76095 146 aa14.28□□□□□ -0.12
CCDC78-201ENST00000293889 IGKV1-16P04430 117 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms