RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 IGKV1-12A0A0C4DH73 117 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 IGKV1D-12P01611 117 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 MIEN1Q9BRT3 115 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 MRPL37Q9BZE1 423 aaKnown RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 GLRX2Q9NS18 164 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 PEF1Q9UBV8 284 aaKnown RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 ATP23Q9Y6H3 246 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 ALPK3Q96L96 1907 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 A8MWL6 223 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 SLC17A3O00476 420 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 OR2H2O95918 312 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 PTGDSP41222 190 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 RIPPLY3P57055 190 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 OR1L1Q8NH94 360 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 DEPPQ9NTK1 212 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 SPAARA0A1B0GVQ0 90 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 HLA-DRB1P01911 266 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 MRPS11P82912 194 aaKnown RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 TM4SF20Q53R12 229 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 OR4S2Q8NH73 311 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 ZNF502Q8TBZ5 544 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 TM2D1Q9BX74 207 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 DOCK11Q5JSL3 2073 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 K7ESF4 209 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 KLF7O75840 302 aaPredicted RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 HBZP02008 142 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 MMDQ15546 238 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 ZNF841Q6ZN19 808 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 ZIC4Q8N9L1 334 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 PCDH15Q96QU1 1955 aa10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 RANBP2P49792 3224 aaKnown RBP10.68□□□□□ -0.7
SLC6A1-201ENST00000287766 OR2T8A6NH00 312 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 CRYBB3P26998 211 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 RIPPLY2Q5TAB7 128 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 GUCD1Q96NT3 240 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 PCNX3Q9H6A9 2034 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 A0A1W2PN81 502 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 ATXN7O15265 892 aaPredicted RBP10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 PRRX1P54821 245 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 KCNMB1Q16558 191 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 SLC25A53Q5H9E4 307 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 SLX1AQ9BQ83 275 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 ZNF430Q9H8G1 570 aaPredicted RBP10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 RNF122Q9H9V4 155 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 ABCA4P78363 2273 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 IGKV1-27A0A075B6S5 117 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 IGKV1D-13A0A0B4J2D9 117 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 IGKV1-13P0DP09 117 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 MAS1LP35410 378 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 NUTF2P61970 127 aaKnown RBP10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 NEU1Q99519 415 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 NPVFQ9HCQ7 196 aa10.67□□□□□ -0.7
SLC6A1-201ENST00000287766 PINLYPA6NC86 204 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 DLEU1O43261 78 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 QRFPP83859 136 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TRIP6Q15654 476 aaKnown RBP10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 FAM89BQ8N5H3 189 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 RNF166Q96A37 237 aaPredicted RBP10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 BOD1Q96IK1 185 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 IGHV3-21A0A0B4J1V1 117 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 NKX2-8O15522 239 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 GNG7O60262 68 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 P2RY6Q15077 328 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 DOLPP1Q86YN1 238 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 FGFRL1Q8N441 504 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 SFRP2Q96HF1 295 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 PNRC2Q9NPJ4 139 aaKnown RBP10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 BPTFQ12830 3046 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 NCBP2LA6PVI3 153 aaKnown RBP10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TSPAN7P41732 249 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 FAM117AQ9C073 453 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 CYTL1Q9NRR1 136 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TMEM250H0YL14 139 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 J3KRW8 73 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 WNT9BO14905 357 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TFF1P04155 84 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 DLX1P56177 255 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 DERL1Q9BUN8 251 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
SLC6A1-201ENST00000287766 TRAV17A0A0B4J275 112 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 NDUFS8O00217 210 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 HEPN1Q6WQI6 88 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 OBSL1O75147 1896 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 F8VVB4 439 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 F8VWA3 439 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 M0R3E3 92 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 SERF1AO75920 110 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 ARL14EPLP0DKL9 152 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 UCP3P55916 312 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 CYP2G1PQ6ZSU1 146 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 MOGAT3Q86VF5 341 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 HIST3H2BBQ8N257 126 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 BMPERQ8N8U9 685 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 FBLN5Q9UBX5 448 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 M0R296 226 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 SSTR5P35346 364 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 C10orf113Q5VZT2 155 aa10.65□□□□□ -0.7
SLC6A1-201ENST00000287766 MYOZ3Q8TDC0 251 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms