RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 RBP1P09455 135 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR4A8P0C604 315 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 SMIM6P0DI80 62 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PRTN3P24158 256 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 AQP1P29972 269 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 DDTP30046 118 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PHBP35232 272 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PRDX4Q13162 271 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 BIKQ13323 160 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 EBPQ15125 230 aaKnown RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 MPPED2Q15777 294 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 BATFQ16520 125 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 GSG1Q2KHT4 349 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 DEFB134Q4QY38 66 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PRR30Q53SZ7 412 aaPredicted RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 C1orf100Q5SVJ3 147 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 ATAD3CQ5T2N8 411 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 C1orf194Q5T5A4 169 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 KDM4DQ6B0I6 523 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 UNQ9370/PRO34162Q6UXP9 181 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 TEX43Q6ZNM6 134 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 TMPPEQ6ZT21 453 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 TRPT1Q86TN4 253 aaKnown RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 ZCCHC24Q8N2G6 241 aaKnown RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 OR51S1Q8NGJ8 323 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR1N2Q8NGR9 330 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR9G1Q8NH87 305 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 ZNF420Q8TAQ5 688 aaPredicted RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 TAF15Q92804 592 aaKnown RBP eCLIP3.49□□□□□ -1.85
CD44-202ENST00000278385 TM4SF18Q96CE8 201 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR2A7Q96R45 310 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 OR52B2Q96RD2 323 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 TCEAL7Q9BRU2 100 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 EFCAB11Q9BUY7 163 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 GGACTQ9BVM4 153 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 SH3BGRL3Q9H299 93 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 UBQLN4Q9NRR5 601 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 COPZ2Q9P299 210 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 PRNDQ9UKY0 176 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 CSAG2Q9Y5P2 127 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 ZFYVE26Q68DK2 2539 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 ZZEF1O43149 2961 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 ZFC3H1O60293 1989 aaKnown RBP3.49□□□□□ -1.85
CD44-202ENST00000278385 COL6A6A6NMZ7 2263 aa3.49□□□□□ -1.85
CD44-202ENST00000278385 BPTFQ12830 3046 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 IGHV1OR15-1A0A075B7D0 117 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 FAM236DA0A1B0GTK5 79 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 A0A1B0GV50 99 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 hADV38S2A0JD32 116 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 GMNCA6NCL1 334 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 ZNF860A6NHJ4 632 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 TRAPPC2LH3BP13 241 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 CYB5BO43169 146 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 MMP23AO75900 390 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 PIAS1O75925 651 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 ZFAND5O76080 213 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 FAM236CP0DP71 79 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 RAB3BP20337 219 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 GLRXP35754 106 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 MAP2K4P45985 399 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 SERPINB10P48595 397 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 BTG2P78543 158 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 HPCAP84074 193 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 ZNF506Q5JVG8 444 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 FAM201AQ5SY85 155 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 AKR1C8PQ5T2L2 129 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 LEMD1Q68G75 181 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 GSG1LQ6UXU4 331 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 SCGB1D4Q6XE38 83 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 GOLT1AQ6ZVE7 132 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 NFE4Q86UQ8 179 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 RPS19BP1Q86WX3 136 aaKnown RBP3.48□□□□□ -1.85
CD44-202ENST00000278385 MMGT1Q8N4V1 131 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 OR4D11Q8NGI4 311 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 OR10G4Q8NGN3 311 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 CCL17Q92583 94 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 TMEM203Q969S6 136 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 MS4A6EQ96DS6 147 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 GNB1LQ9BYB4 327 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 DEFB126Q9BYW3 111 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 PRTFDC1Q9NRG1 225 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 LYRM2Q9NU23 88 aaPredicted RBP3.48□□□□□ -1.85
CD44-202ENST00000278385 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 COA4Q9NYJ1 87 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 ZNF629Q9UEG4 869 aaPredicted RBP3.48□□□□□ -1.85
CD44-202ENST00000278385 RSL24D1Q9UHA3 163 aaKnown RBP3.48□□□□□ -1.85
CD44-202ENST00000278385 SIGLEC7Q9Y286 467 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 UGT2A1Q9Y4X1 527 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 BSNQ9UPA5 3926 aa3.48□□□□□ -1.85
CD44-202ENST00000278385 A0A087WX48 190 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 IGKV3D-11A0A0A0MRZ8 115 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 A0A0J9YXV3 536 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 C9orf170A2RU37 121 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FAM25AB3EWG3 89 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FAM25CB3EWG5 89 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 FAM25GB3EWG6 89 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 G3V2T6 193 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 UPK2O00526 184 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 TPST1O60507 370 aa3.47□□□□□ -1.85
CD44-202ENST00000278385 GADD45GO95257 159 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms