RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 SCGB1C1Q8TD33 95 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 SMCO4Q9NRQ5 59 aa18.88■□□□□ 0.61
RAB40B-201ENST00000269347 A0A1B0GW64 132 aa18.87■□□□□ 0.61
RAB40B-201ENST00000269347 FGF8P55075 233 aaPredicted RBP18.87■□□□□ 0.61
RAB40B-201ENST00000269347 HAGHQ16775 308 aa18.87■□□□□ 0.61
RAB40B-201ENST00000269347 LRRC10Q5BKY1 277 aa18.87■□□□□ 0.61
RAB40B-201ENST00000269347 ZNF833PQ6ZTB9 187 aa18.87■□□□□ 0.61
RAB40B-201ENST00000269347 GAL3ST2Q9H3Q3 398 aa18.87■□□□□ 0.61
RAB40B-201ENST00000269347 ZNF841Q6ZN19 808 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 RXFP4Q8TDU9 374 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 SLC35B3Q9H1N7 401 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 RAB9BQ9NP90 201 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 RPS10P5Q9NQ39 176 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 TCF19Q9Y242 345 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 MDKP21741 143 aaPredicted RBP18.86■□□□□ 0.61
RAB40B-201ENST00000269347 RAB2AP61019 212 aa18.86■□□□□ 0.61
RAB40B-201ENST00000269347 FAM90A9PA6NNJ1 464 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 C15orf61A6NNL5 157 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 PRSS46E5RG02 174 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OPN1MWP04001 364 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 SOD3P08294 240 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 IL6RP08887 468 aaPredicted RBP18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OPN1MW2P0DN77 364 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OPN1MW3P0DN78 364 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OR13C7P0DN81 318 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 DAOP14920 347 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 AKR1C3P42330 323 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 KIR2DS2P43631 304 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 SPCS3P61009 180 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 ERVK-16P61578 105 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 TMEM155Q4W5P6 130 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 AWAT1Q58HT5 328 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 PSMG3Q9BT73 122 aaPredicted RBP18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OR8U8P0C7N1 319 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 LCN15Q6UWW0 184 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OR10P1Q8NGE3 313 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 OR13D1Q8NGV5 346 aa18.85■□□□□ 0.61
RAB40B-201ENST00000269347 RCC1LQ96I51 464 aaKnown RBP18.85■□□□□ 0.61
RAB40B-201ENST00000269347 PARD6GQ9BYG4 376 aaPredicted RBP18.85■□□□□ 0.61
RAB40B-201ENST00000269347 BTBD17A6NE02 478 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 M0R036 132 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 SNRNP70P08621 437 aaKnown RBP18.84■□□□□ 0.61
RAB40B-201ENST00000269347 VWC2Q2TAL6 325 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 PDLIM3Q53GG5 364 aaPredicted RBP18.84■□□□□ 0.61
RAB40B-201ENST00000269347 RPP25LQ8N5L8 163 aaKnown RBP18.84■□□□□ 0.61
RAB40B-201ENST00000269347 SAV1Q9H4B6 383 aaPredicted RBP18.84■□□□□ 0.61
RAB40B-201ENST00000269347 SLC35D1Q9NTN3 355 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 TMEM14BQ9NUH8 114 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 AKAP6Q13023 2319 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 IGSF10Q6WRI0 2623 aa18.84■□□□□ 0.61
RAB40B-201ENST00000269347 RBFOX3A6NFN3 312 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 GNB2P62879 340 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 ICAM4Q14773 271 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 C1orf159Q96HA4 380 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 CIB3Q96Q77 187 aaPredicted RBP18.83■□□□□ 0.61
RAB40B-201ENST00000269347 TMEM147Q9BVK8 224 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 SMDT1Q9H4I9 107 aa18.83■□□□□ 0.61
RAB40B-201ENST00000269347 COLCA2A8K830 154 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 IGHV2-70P01814 119 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 CRYBA1P05813 215 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 FGF7P21781 194 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 ZNF429Q86V71 674 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 CLDND2Q8NHS1 167 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 CLCC1Q96S66 551 aa18.83■□□□□ 0.6
RAB40B-201ENST00000269347 C7orf77A4D0Y5 90 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 J3QR06 171 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 HMGB3O15347 200 aaKnown RBP18.82■□□□□ 0.6
RAB40B-201ENST00000269347 C15orf54Q8N8G6 183 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 OR10A7Q8NGE5 316 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 OR52E5Q8NH55 327 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 C20orf24Q9BUV8 137 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 HEYLQ9NQ87 328 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-201ENST00000269347 KIAA1456Q9P272 454 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 H0YJW9 148 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 TLE4Q04727 773 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 POU2AF1Q16633 256 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 DPPA3Q6W0C5 159 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 CENPVQ7Z7K6 275 aaPredicted RBP18.82■□□□□ 0.6
RAB40B-201ENST00000269347 ST6GALNAC6Q969X2 333 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 RITA1Q96K30 269 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 NPCDR1Q9BY65 106 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 HIPK2Q9H2X6 1198 aa18.82■□□□□ 0.6
RAB40B-201ENST00000269347 IFNA10P01566 189 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 IGHV1-8P0DP01 117 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 C11orf71Q6IPW1 123 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 FOXA2Q9Y261 457 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-201ENST00000269347 NAV3Q8IVL0 2385 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 SAA1P0DJI8 122 aaPredicted RBP18.81■□□□□ 0.6
RAB40B-201ENST00000269347 PAX6P26367 422 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 RAB13P51153 203 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 TMEM30BQ3MIR4 351 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 ADTRPQ96IZ2 230 aa18.81■□□□□ 0.6
RAB40B-201ENST00000269347 E7EUB6 86 aa18.8■□□□□ 0.6
RAB40B-201ENST00000269347 GCSAMLQ5JQS6 135 aa18.8■□□□□ 0.6
RAB40B-201ENST00000269347 SOHLH1Q5JUK2 328 aa18.8■□□□□ 0.6
RAB40B-201ENST00000269347 ZNF596Q8TC21 504 aa18.8■□□□□ 0.6
RAB40B-201ENST00000269347 SCAF4O95104 1147 aaKnown RBP18.79■□□□□ 0.6
RAB40B-201ENST00000269347 SRP19P09132 144 aaKnown RBP18.79■□□□□ 0.6
RAB40B-201ENST00000269347 SERF2P84101 59 aa18.79■□□□□ 0.6
RAB40B-201ENST00000269347 TMEM41BQ5BJD5 291 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms