RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 DDB2Q92466 427 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 RALYQ9UKM9 306 aaKnown RBP10.3□□□□□ -0.76
BEST3-201ENST00000266661 GAB2Q9UQC2 676 aa10.3□□□□□ -0.76
BEST3-201ENST00000266661 K7EM74 188 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 SRP14P37108 136 aaKnown RBP10.29□□□□□ -0.76
BEST3-201ENST00000266661 CCL11P51671 97 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 ZNF134P52741 427 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 RELBQ01201 579 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 C1orf229Q6ZS94 237 aaPredicted RBP10.29□□□□□ -0.76
BEST3-201ENST00000266661 OR1P1Q8NH06 330 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 STARD4Q96DR4 205 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 PCGF1Q9BSM1 259 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 IFI27L2Q9H2X8 130 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 GFOD1Q9NXC2 390 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 SLC25A15Q9Y619 301 aa10.29□□□□□ -0.76
BEST3-201ENST00000266661 C11orf94C9JXX5 98 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 ITGB1BP1O14713 200 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 RRHO14718 337 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 MGST3O14880 152 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 FCGR3BO75015 233 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 MPDU1O75352 247 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 AMBPP02760 352 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 CD99P14209 185 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 GCH1P30793 250 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 OPRK1P41145 380 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 GPR12P47775 334 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 FAM3BP58499 235 aaPredicted RBP10.28□□□□□ -0.76
BEST3-201ENST00000266661 GAMTQ14353 236 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 ACTL10Q5JWF8 245 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 TREML4Q6UXN2 200 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 SEM1Q6ZVN7 128 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 LINC01551Q86U37 167 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 GCSAMQ8N6F7 178 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 NECAP1Q8NC96 275 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 OR5R1Q8NH85 324 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 PACRGQ96M98 296 aaPredicted RBP10.28□□□□□ -0.76
BEST3-201ENST00000266661 NCOR1P1Q9H4R4 102 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 PRORYQ9H606 182 aa10.28□□□□□ -0.76
BEST3-201ENST00000266661 TLN1Q9Y490 2541 aaKnown RBP10.28□□□□□ -0.76
BEST3-201ENST00000266661 DVL1O14640 695 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 LHBP01229 141 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 RD3LP0DJH9 198 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 HOXC12P31275 282 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 GPX4P36969 197 aaPredicted RBP10.27□□□□□ -0.76
BEST3-201ENST00000266661 JOSD1Q15040 202 aaPredicted RBP10.27□□□□□ -0.76
BEST3-201ENST00000266661 TBR1Q16650 682 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 SPRNQ5BIV9 151 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 TMEM144Q7Z5S9 345 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 SARAFQ96BY9 339 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 OR5B12Q96R08 314 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 PFDN5Q99471 154 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 MGST2Q99735 147 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 KCNIP2Q9NS61 270 aa10.27□□□□□ -0.76
BEST3-201ENST00000266661 LSM4Q9Y4Z0 139 aaKnown RBP10.27□□□□□ -0.76
BEST3-201ENST00000266661 CHD6Q8TD26 2715 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 RELNP78509 3460 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 TRAV3A0A0B4J244 114 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 TRAV38-1A0A0B4J264 116 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 PDE6DO43924 150 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 FAM87AP0C7U9 286 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 ATP5G3P48201 142 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 MZT1Q08AG7 82 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 EDDM3AQ14507 147 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 P2RY6Q15077 328 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 UTF1Q5T230 341 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 LRP11Q86VZ4 500 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 LINC00469Q8N7U9 141 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 ACY3Q96HD9 319 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.77
BEST3-201ENST00000266661 OPN3Q9H1Y3 402 aaPredicted RBP10.27□□□□□ -0.77
BEST3-201ENST00000266661 DIDO1Q9BTC0 2240 aaKnown RBP10.26□□□□□ -0.77
BEST3-201ENST00000266661 TRAV17A0A0B4J275 112 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 TRGV8A0A0C4DH27 118 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 AHRRA9YTQ3 701 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 PPP5D1E7EU14 171 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 M0R1X1 148 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 RBMXL2O75526 392 aaKnown RBP10.26□□□□□ -0.77
BEST3-201ENST00000266661 STAG3L2P0CL84 134 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 STAG3L3P0CL85 134 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
BEST3-201ENST00000266661 LCN2P80188 198 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 RPL39P5Q59GN2 51 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 PRAMEF5Q5TYX0 476 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 BHLHA15Q7RTS1 189 aaPredicted RBP10.26□□□□□ -0.77
BEST3-201ENST00000266661 CISD2Q8N5K1 135 aaKnown RBP10.26□□□□□ -0.77
BEST3-201ENST00000266661 S100PBPQ96BU1 408 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 MS4A5Q9H3V2 200 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 CACNA1DQ01668 2161 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 PRR14LQ5THK1 2151 aa10.26□□□□□ -0.77
BEST3-201ENST00000266661 F6UZH7 168 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 SLC31A2O15432 143 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 IGHV3-13P01766 116 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 UCNP55089 124 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 RPP30P78346 268 aaKnown RBP10.25□□□□□ -0.77
BEST3-201ENST00000266661 LY6DQ14210 128 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 LTC4SQ16873 150 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 C17orf58Q2M2W7 97 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 ZNF114Q8NC26 417 aa10.25□□□□□ -0.77
BEST3-201ENST00000266661 OR2Z1Q8NG97 314 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms