RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 TMEM106BQ9NUM4 274 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 WDR83OSQ9Y284 106 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 PPIAL4AQ9Y536 164 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 TNCP24821 2201 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 ACACBO00763 2458 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 MAP1LC3B2A6NCE7 125 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 C15orf61A6NNL5 157 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 H3BQ15 152 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 CRYBA1P05813 215 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 CT45A6P0DMU7 189 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 CT45A5P0DMU8 189 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 CT45A7P0DMV0 189 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 NDUFB7P17568 137 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 ELLP55199 621 aaPredicted RBP9.74□□□□□ -0.85
CDKL3-201ENST00000265334 RPS16P62249 146 aaKnown RBP9.74□□□□□ -0.85
CDKL3-201ENST00000265334 OR4A47Q6IF82 309 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 HEPN1Q6WQI6 88 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM170AQ8WVE7 144 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 NEUROG1Q92886 237 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 HIST1H2BAQ96A08 127 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 MAP1LC3BQ9GZQ8 125 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 TCF19Q9Y242 345 aa9.74□□□□□ -0.85
CDKL3-201ENST00000265334 FOXA2Q9Y261 457 aaPredicted RBP9.74□□□□□ -0.85
CDKL3-201ENST00000265334 ANKHD1Q8IWZ3 2542 aaKnown RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 ADGRG4Q8IZF6 3080 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 MBP02144 154 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 APOBEC3AP31941 199 aaPredicted RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 RPL31P62899 125 aaKnown RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 AKIRIN2Q53H80 203 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 AVPI1Q5T686 147 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM200BQ69YZ2 307 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 GGACTQ9BVM4 153 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 GAL3ST2Q9H3Q3 398 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 KAAG1Q9UBP8 84 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 PUS1Q9Y606 427 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 CTXND1A0A1B0GTU2 59 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 RRHO14718 337 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 DAOP14920 347 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 MAS1LP35410 378 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 GNG10P50151 68 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 RPP30P78346 268 aaKnown RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 C4orf17Q53FE4 359 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 FAM90A2PQ658T7 463 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF833PQ6ZTB9 187 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 YPEL4Q96NS1 127 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 P2RX4Q99571 388 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 MS4A5Q9H3V2 200 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 HEYLQ9NQ87 328 aaPredicted RBP9.73□□□□□ -0.85
CDKL3-201ENST00000265334 SLC39A9Q9NUM3 307 aa9.73□□□□□ -0.85
CDKL3-201ENST00000265334 B9A039 149 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 HRASP01112 189 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 MT-ND4LP03901 98 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 AGAP20933 346 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 CD1BP29016 333 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 ERVFRD-1P60508 538 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 HSPE1P61604 102 aaKnown RBP9.72□□□□□ -0.85
CDKL3-201ENST00000265334 RNF212Q495C1 297 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 LYPD2Q6UXB3 125 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF596Q8TC21 504 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 CCL17Q92583 94 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 LHX4Q969G2 390 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 RAB39BQ96DA2 213 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 TMEM204Q9BSN7 226 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 MLXQ9UH92 298 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 HIVEP3Q5T1R4 2406 aa9.72□□□□□ -0.85
CDKL3-201ENST00000265334 ZFP92A6NM28 416 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 SIAH2O43255 324 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 IFNA10P01566 189 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 LOXP28300 417 aaPredicted RBP9.71□□□□□ -0.85
CDKL3-201ENST00000265334 DLK1P80370 383 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 FFAR4Q5NUL3 377 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 SLC35E3Q7Z769 313 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 OR10G9Q8NGN4 311 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 OR10G7Q8NGN6 311 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 ZNF714Q96N38 554 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 ZNRD1Q9P1U0 126 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 CTSZQ9UBR2 303 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 VAX2Q9UIW0 290 aa9.71□□□□□ -0.85
CDKL3-201ENST00000265334 A0A087WWC5 75 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 SOX15O60248 233 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 MPDU1O75352 247 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 NDUFS6O75380 124 aaKnown RBP9.71□□□□□ -0.86
CDKL3-201ENST00000265334 CCL3L1P16619 93 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 DLX6P56179 175 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 ABHD12Q8N2K0 398 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 C8orf31Q8N9H6 132 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 TVP23CQ96ET8 276 aa9.71□□□□□ -0.86
CDKL3-201ENST00000265334 KALRNO60229 2985 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 A0A1W2PPE2 198 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 A0A1W2PPH5 198 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 SRRM4A7MD48 611 aaKnown RBP9.7□□□□□ -0.86
CDKL3-201ENST00000265334 SEC14L6B5MCN3 397 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 C17orf112F2Z3M2 114 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 UPK2O00526 184 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 NDUFB3O43676 98 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 HNF4GQ14541 408 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
CDKL3-201ENST00000265334 LINC00311Q8N616 119 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms