RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 PRAMEF5Q5TYX0 476 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 OR4A16Q8NH70 328 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 TXNDC17Q9BRA2 123 aa9.13□□□□□ -0.95
MSH3-201ENST00000265081 ZFP92A6NM28 416 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 HSPE1P61604 102 aaKnown RBP9.12□□□□□ -0.95
MSH3-201ENST00000265081 EFNB3Q15768 340 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PNKDQ8N490 385 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 CHODLQ9H9P2 273 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 ARL2-SNX15V9GYD0 113 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 AP4M1O00189 453 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 TNFRSF1AP19438 455 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PLA2G5P39877 138 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 ERVK-16P61578 105 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 RAB11AP62491 216 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 S100A12P80511 92 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 ARSJQ5FYB0 599 aaPredicted RBP9.12□□□□□ -0.95
MSH3-201ENST00000265081 FAM216BQ8N7L0 139 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 KNTC1P50748 2209 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRRG2O14669 202 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 IFNA17P01571 189 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRR20EP86478 221 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRR20CP86479 221 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRR20DP86480 221 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRR20BP86481 221 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRR20AP86496 221 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 PRCDQ00LT1 54 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 BSPH1Q075Z2 132 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 SSX2Q16385 188 aa9.12□□□□□ -0.95
MSH3-201ENST00000265081 UPK2O00526 184 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 ATXN7O15265 892 aaPredicted RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 GYPAP02724 150 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 BMP5P22003 454 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 EDDM3BP56851 147 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 FBXL19-AS1Q494R0 122 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 SPACA3Q8IXA5 215 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 MS4A5Q9H3V2 200 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 USF3Q68DE3 2245 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 CYB5BO43169 146 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 PFN1P07737 140 aaKnown RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 OR4A8P0C604 315 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 HOXA5P20719 270 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 NPPCP23582 126 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 TMEM177Q53S58 311 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 NCMAPQ5T1S8 102 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 ST6GALNAC6Q969X2 333 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 CCL13Q99616 98 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 BOD1L1Q8NFC6 3051 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 hADV38S2A0JD32 116 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 RPL29P47914 159 aaKnown RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 RPL23P62829 140 aaKnown RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 MRPS11P82912 194 aaKnown RBP9.11□□□□□ -0.95
MSH3-201ENST00000265081 ZNF343Q6P1L6 599 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 VKORC1L1Q8N0U8 176 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 LRFN3Q9BTN0 628 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 SLC25A22Q9H936 323 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 KCNIP2Q9NS61 270 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 DCAF16Q9NXF7 216 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 PRNDQ9UKY0 176 aa9.11□□□□□ -0.95
MSH3-201ENST00000265081 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 CLDN34H7C241 214 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OPN1MWP04001 364 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OPN1MW2P0DN77 364 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OPN1MW3P0DN78 364 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 CD99P14209 185 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 ASCL5Q7RTU5 278 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OR4A5Q8NH83 315 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 SSX3Q99909 188 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 TGIF2-C20orf24A0A0A6YYL0 155 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 TRAV38-1A0A0B4J264 116 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 CTAG1AP78358 180 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 C2orf83Q53S99 150 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 SPINK9Q5DT21 86 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 GAL3ST2Q9H3Q3 398 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 HEATR1Q9H583 2144 aaKnown RBP9.1□□□□□ -0.95
MSH3-201ENST00000265081 NKX6-3A6NJ46 265 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 PDE6DO43924 150 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 HRASP01112 189 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 VHLLQ6RSH7 139 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OR1L8Q8NGR8 309 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 GATAD1Q8WUU5 269 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 PARLQ9H300 379 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 DOK5Q9P104 306 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 SRRM4A7MD48 611 aaKnown RBP9.1□□□□□ -0.95
MSH3-201ENST00000265081 LTC4SQ16873 150 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 MRGPRG-AS1Q2M3A8 158 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 AKIRIN2Q53H80 203 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 OSR1Q8TAX0 266 aaPredicted RBP9.1□□□□□ -0.95
MSH3-201ENST00000265081 LEAP2Q969E1 77 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 RHOVQ96L33 236 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 C12orf57Q99622 126 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 TCEAL7Q9BRU2 100 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 PCGF1Q9BSM1 259 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 NPVFQ9HCQ7 196 aa9.1□□□□□ -0.95
MSH3-201ENST00000265081 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
MSH3-201ENST00000265081 SLC24A4Q8NFF2 622 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms