RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 STEAP1BQ6NZ63 245 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 LPCAT3Q6P1A2 487 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 MMD2Q8IY49 270 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 CMTM1Q8IZ96 169 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 ARRDC1Q8N5I2 433 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 CD300LFQ8TDQ1 290 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 SRSF12Q8WXF0 261 aaKnown RBP6.54□□□□□ -1.36
ERCC8-201ENST00000265038 DGCR14Q96DF8 476 aaKnown RBP6.54□□□□□ -1.36
ERCC8-201ENST00000265038 TMEM68Q96MH6 324 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 OR5B12Q96R08 314 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 VSIG4Q9Y279 399 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 CMYA5Q8N3K9 4069 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 WNK1Q9H4A3 2382 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 TRAV3A0A0B4J244 114 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 A0A1B0GW64 132 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 APELAP0DMC3 54 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 F2RP25116 425 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 LPAR6P43657 344 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 TAS2R31P59538 309 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 RUNX1Q01196 453 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 DEFA6Q01524 100 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 POU2AF1Q16633 256 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 OR4A47Q6IF82 309 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 FAAP20Q6NZ36 180 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 SLC38A6Q8IZM9 456 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 POC5Q8NA72 575 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 VSTM2AQ8TAG5 236 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 ALX4Q9H161 411 aaPredicted RBP6.54□□□□□ -1.36
ERCC8-201ENST00000265038 PLEKHA2Q9HB19 425 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 BET1LQ9NYM9 111 aa6.54□□□□□ -1.36
ERCC8-201ENST00000265038 MGAM2Q2M2H8 2515 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 TEX22C9J3V5 150 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 CREBL2O60519 120 aaPredicted RBP6.53□□□□□ -1.36
ERCC8-201ENST00000265038 MYOD1P15172 320 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 NQO2P16083 231 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 PI3P19957 117 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 FHL3Q13643 280 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 KPRPQ5T749 579 aaPredicted RBP6.53□□□□□ -1.36
ERCC8-201ENST00000265038 FOXB2Q5VYV0 432 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 TBC1D26Q86UD7 250 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 OR11H1Q8NG94 326 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 OR4A5Q8NH83 315 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 TERB2Q8NHR7 220 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 MRGPRFQ96AM1 343 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 PHB2Q99623 299 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 V9GYH0 126 aa6.53□□□□□ -1.36
ERCC8-201ENST00000265038 ANKRD20A5PA0PJZ0 165 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 DPPA5A6NC42 116 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 HMX3A6NHT5 357 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 CGB1A6NKQ9 187 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 H3BUA1 57 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 UPK2O00526 184 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RBMXL2O75526 392 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 ACTL6BO94805 426 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 BRI3O95415 125 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 TRGV3P03979 118 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 PGAM2P15259 253 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RPA2P15927 270 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 CD40LGP29965 261 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 MAS1LP35410 378 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 TPPP2P59282 170 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RPL8P62917 257 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 CCDC190Q86UF4 302 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 TTC9CQ8N5M4 171 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 ADAD2Q8NCV1 583 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 OR1N2Q8NGR9 330 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RCC1LQ96I51 464 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 AIFM2Q9BRQ8 373 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 HRASLSQ9HDD0 168 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 SLC2A9Q9NRM0 540 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 ZNF355PQ9NSJ1 428 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 TMEM140Q9NV12 185 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 MPPED1O15442 326 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 IGHV3-11P01762 117 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 OR9G9P0C7N8 305 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 HLA-GP17693 338 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RPL27AP46776 148 aaKnown RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 PPP5CP53041 499 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 RND3P61587 244 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 DEFA5Q01523 94 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 MEF2DQ14814 521 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 ZNF79Q15937 498 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 SCGB2B2Q4G0G5 96 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 OR4C16Q8NGL9 310 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 ZNF486Q96H40 463 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 SPIN2AQ99865 258 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 SPIN2BQ9BPZ2 258 aa6.52□□□□□ -1.37
ERCC8-201ENST00000265038 THAP7Q9BT49 309 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 FAM212BQ9NTI7 297 aaPredicted RBP6.52□□□□□ -1.37
ERCC8-201ENST00000265038 MARCH11A6NNE9 402 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 KRASP01116 189 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 IGKV1-39P01597 117 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 PRH1P02810 166 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 IGKV1D-39P04432 117 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
ERCC8-201ENST00000265038 PTBP1P26599 531 aaKnown RBP eCLIP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms