RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CA6P23280 308 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 OCIAD2Q56VL3 154 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 OCIAD1Q9NX40 245 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 NAT8BQ9UHF3 227 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 LOC400499M0QZD8 3231 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 A0A1W2PS18 150 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 FAM166BA8MTA8 275 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
XRCC1-201ENST00000262887 TGFBR3Q03167 851 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 OR10J3Q5JRS4 329 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 TCTEX1D1Q8N7M0 179 aa12.51□□□□□ -0.41
XRCC1-201ENST00000262887 MBNL3Q9NUK0 354 aaKnown RBP12.51□□□□□ -0.41
XRCC1-201ENST00000262887 C17orf98A8MV24 154 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 CLDN14O95500 239 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 STAG3L2P0CL84 134 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 STAG3L3P0CL85 134 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 HINT1P49773 126 aaPredicted RBP12.5□□□□□ -0.41
XRCC1-201ENST00000262887 ZXDAP98168 799 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 DCAF12Q5T6F0 453 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 ZBTB34Q8NCN2 500 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 ST6GALNAC3Q8NDV1 305 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 OR2M7Q8NG81 312 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 NCOR1O75376 2440 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 TRAV30A0A087WSZ9 112 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 DPRXA6NFQ7 191 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 C15orf62A8K5M9 175 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 J3QT63 122 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 RAB29O14966 203 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 FOXG1P55316 489 aaPredicted RBP12.5□□□□□ -0.41
XRCC1-201ENST00000262887 RPL31P62899 125 aaKnown RBP12.5□□□□□ -0.41
XRCC1-201ENST00000262887 LDLRAD2Q5SZI1 272 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 C5orf30Q96GV9 206 aa12.5□□□□□ -0.41
XRCC1-201ENST00000262887 YTHDF2Q9Y5A9 579 aaKnown RBP12.5□□□□□ -0.41
XRCC1-201ENST00000262887 MT-ND6P03923 174 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 C3orf79P0CE67 100 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 ZNF83P51522 516 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 PRRX1P54821 245 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 SMRP1Q8NCR6 262 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 TMEM45BQ96B21 275 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 RCHY1Q96PM5 261 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 WNT10AQ9GZT5 417 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 CST9LQ9H4G1 147 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 BET1LQ9NYM9 111 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 TSPOP30536 169 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 OPRK1P41145 380 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 ZNF718Q3SXZ3 478 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 PDLIM3Q53GG5 364 aaPredicted RBP12.49□□□□□ -0.41
XRCC1-201ENST00000262887 WDR73Q6P4I2 378 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 POM121L2Q96KW2 1035 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 MRPS16Q9Y3D3 137 aaKnown RBP12.49□□□□□ -0.41
XRCC1-201ENST00000262887 GTF3C1Q12789 2109 aa12.49□□□□□ -0.41
XRCC1-201ENST00000262887 RRHO14718 337 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 ZNF324O75467 553 aaPredicted RBP12.48□□□□□ -0.41
XRCC1-201ENST00000262887 BRWD1-AS2P59051 145 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 ESPL1Q14674 2120 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 KIAA1644Q3SXP7 199 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 LOXL4Q96JB6 756 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 EAF1Q96JC9 268 aaPredicted RBP12.48□□□□□ -0.41
XRCC1-201ENST00000262887 SLC35D1Q9NTN3 355 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 V9GYV3 84 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 CFAP47Q6ZTR5 3102 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 C9JCJ5 164 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 MPDU1O75352 247 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 NEURL1O76050 574 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 FAM53AQ6NSI3 398 aaPredicted RBP12.48□□□□□ -0.41
XRCC1-201ENST00000262887 GALMQ96C23 342 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 LY96Q9Y6Y9 160 aa12.48□□□□□ -0.41
XRCC1-201ENST00000262887 REG1AP05451 166 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 GDF1P27539 372 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 RPS20P60866 119 aaKnown RBP12.47□□□□□ -0.41
XRCC1-201ENST00000262887 PLP2Q04941 152 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 LHFPL4Q7Z7J7 247 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 DEPPQ9NTK1 212 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 R4GN57 208 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 NDUFS8O00217 210 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 SPINK4O60575 86 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 TNFSF4P23510 183 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 NIT1Q86X76 327 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 OR52L2PQ8NGH6 319 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 UHRF2Q96PU4 802 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 KMT2EQ8IZD2 1858 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 NCKAP5O14513 1909 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 TRGV10A0A0A0MS01 117 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 KLF7O75840 302 aaPredicted RBP12.47□□□□□ -0.41
XRCC1-201ENST00000262887 GFRA1P56159 465 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
XRCC1-201ENST00000262887 MIC13Q5XKP0 118 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 TMEM136Q6ZRR5 245 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 NINJ1Q92982 152 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 BORCS7Q96B45 105 aa12.47□□□□□ -0.41
XRCC1-201ENST00000262887 DMXL1Q9Y485 3027 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 GCHFRP30047 84 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 CX3CL1P78423 397 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 SRYQ05066 204 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 SPATA46Q5T0L3 261 aa12.46□□□□□ -0.41
XRCC1-201ENST00000262887 TREML4Q6UXN2 200 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms