RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 PET117Q6UWS5 81 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 APCDD1LQ8NCL9 501 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 SCARF2Q96GP6 870 aaPredicted RBP10.29□□□□□ -0.76
COL8A1-201ENST00000261037 LOC285556D6RIA3 1793 aa10.29□□□□□ -0.76
COL8A1-201ENST00000261037 TMEM186Q96B77 213 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 A0A1W2PR77 199 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 PSMB11A5LHX3 300 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 NPFFO15130 113 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF146Q15072 292 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 OR51G1Q8NGK1 321 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 ZXDCQ2QGD7 858 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-201ENST00000261037 FAM209AQ5JX71 171 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 LINC01590Q5TEZ4 76 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 CTHRC1Q96CG8 243 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 AQP10Q96PS8 301 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 PRSS2P07478 247 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 PTGDSP41222 190 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 OR10S1Q8NGN2 331 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 GALNT14Q96FL9 552 aa10.28□□□□□ -0.76
COL8A1-201ENST00000261037 ZNF703Q9H7S9 590 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-201ENST00000261037 BEX4Q9NWD9 120 aaPredicted RBP10.28□□□□□ -0.76
COL8A1-201ENST00000261037 ARID2Q68CP9 1835 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 IGKV1D-33P01593 117 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 IGKV1-33P01594 117 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 AGAP20933 346 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 OR4D5Q8NGN0 318 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 ELOVL5Q9NYP7 299 aa10.27□□□□□ -0.76
COL8A1-201ENST00000261037 B9A039 149 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 SOD3P08294 240 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 BSPH1Q075Z2 132 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 ACP7Q6ZNF0 438 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 SPSB4Q96A44 273 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 FBXL15Q9H469 300 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 CHCHD2Q9Y6H1 151 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 TMEM238LA0A1B0GVL6 79 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 A6NJY4 79 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 PROB1E7EW31 1015 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 HLA-DQA1P01909 254 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 APOBEC3AP31941 199 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 TFF3Q07654 80 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 FAM216BQ8N7L0 139 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 OR11H4Q8NGC9 324 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 ZNF646O15015 1829 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 MT-ND6P03923 174 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 IL6RP08887 468 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 COX5BP10606 129 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 FBLIM1Q8WUP2 373 aa10.27□□□□□ -0.77
COL8A1-201ENST00000261037 FOXA2Q9Y261 457 aaPredicted RBP10.27□□□□□ -0.77
COL8A1-201ENST00000261037 RBFOX2O43251 390 aaKnown RBP eCLIP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 GCHFRP30047 84 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 SNRPD3P62318 126 aaKnown RBP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 BIVMQ86UB2 503 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 SFRP2Q96HF1 295 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 SMIM8Q96KF7 97 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 TMEM106BQ9NUM4 274 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CELA3BP08861 270 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 RPS20P60866 119 aaKnown RBP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 IGLV3-21P80748 117 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CD69Q07108 199 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 COL5A1-AS1Q5SY13 56 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CYP2G1PQ6ZSU1 146 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 Q6ZT83 130 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 POC1AQ8NBT0 407 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 LTBP1Q14766 1721 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CXorf65A6NEN9 183 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CECR9P0C854 216 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 CENPWQ5EE01 88 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 UNQ9370/PRO34162Q6UXP9 181 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 TMEM14DPA8MWL7 114 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 HOXB1P14653 301 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 ICAM4Q14773 271 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 C10orf128Q5T292 105 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 FAM159AQ6UWV7 190 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 ITLN2Q8WWU7 325 aaPredicted RBP10.26□□□□□ -0.77
COL8A1-201ENST00000261037 TFF1P04155 84 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 FABP2P12104 132 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 SMDT1Q9H4I9 107 aa10.26□□□□□ -0.77
COL8A1-201ENST00000261037 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 TGFBR3LH3BV60 316 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 COX6CP09669 75 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 RIPPLY2Q5TAB7 128 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 FAM181AQ8N9Y4 354 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 NPDC1Q9NQX5 325 aaPredicted RBP10.25□□□□□ -0.77
COL8A1-201ENST00000261037 SPAG17Q6Q759 2223 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 CD200R1LQ6Q8B3 271 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 ERVH48-1M5A8F1 160 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 FOXH1O75593 365 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 IGFBP2P18065 325 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 OR13A1Q8NGR1 328 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 OR13C6PQ8NH95 151 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 MARVELD3Q96A59 401 aa10.25□□□□□ -0.77
COL8A1-201ENST00000261037 REPIN1Q9BWE0 567 aaKnown RBP10.25□□□□□ -0.77
COL8A1-201ENST00000261037 BRCA1P38398 1863 aaKnown RBP10.25□□□□□ -0.77
COL8A1-201ENST00000261037 SIAH2O43255 324 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms