RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 A0A1W2PPE2 198 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 A0A1W2PR64 198 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 A0A1W2PRV1 198 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 FAM90A26D6RGX4 464 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 NQO2P16083 231 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 GATA3P23771 443 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 COX7A1P24310 79 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 SRP14P37108 136 aaKnown RBP14.12□□□□□ -0.15
SRSF1-201ENST00000258962 HLA-DRB5Q30154 266 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 OR2C3Q8N628 320 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 MED9Q9NWA0 146 aa14.12□□□□□ -0.15
SRSF1-201ENST00000258962 RPS10-NUDT3A0A1W2PQS6 291 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 IGSF23A1L1A6 192 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 FAM24AA6NFZ4 105 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 H0YJW9 148 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 SYNGR2O43760 224 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 GAPDHP04406 335 aaKnown RBP14.11□□□□□ -0.15
SRSF1-201ENST00000258962 FAM157CP0CG43 387 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 SRD5A1P18405 259 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 TNFRSF9Q07011 255 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 DHRS7BQ6IAN0 325 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-201ENST00000258962 IL17RELQ6ZVW7 336 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 SSX9Q7RTT3 188 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 BEND2Q8NDZ0 799 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 OR5AN1Q8NGI8 311 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 SIRT7Q9NRC8 400 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-201ENST00000258962 LYRM2Q9NU23 88 aaPredicted RBP14.11□□□□□ -0.15
SRSF1-201ENST00000258962 HSPB7Q9UBY9 170 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 FBXL17Q9UF56 701 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 PFDN2Q9UHV9 154 aa14.11□□□□□ -0.15
SRSF1-201ENST00000258962 J3QLI3 93 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 ENSAO43768 121 aaKnown RBP14.1□□□□□ -0.15
SRSF1-201ENST00000258962 IGKV1-16P04430 117 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 ARHGDIBP52566 201 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 PRRX1P54821 245 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 ERVK-16P61578 105 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 EWSR1Q01844 656 aaKnown RBP eCLIP14.1□□□□□ -0.15
SRSF1-201ENST00000258962 POU2AF1Q16633 256 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 RTL8BQ17RB0 113 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 AARDQ4LEZ3 155 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 HCP5Q6MZN7 132 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 PNKDQ8N490 385 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 TEX29Q8N6K0 151 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 KIR3DL3Q8N743 410 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 OR4P4Q8NGL7 312 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 RAB40CQ96S21 281 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 TMEM140Q9NV12 185 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 CACFD1Q9UGQ2 172 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 POLR3KQ9Y2Y1 108 aaPredicted RBP14.1□□□□□ -0.15
SRSF1-201ENST00000258962 FAM90A9PA6NNJ1 464 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 BUB1B-PAK6H3BSN5 160 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 MED6O75586 246 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 IL3RAP26951 378 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 RPL23AP62750 156 aaKnown RBP14.1□□□□□ -0.15
SRSF1-201ENST00000258962 NHLH2Q02577 135 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 TGIF2LXQ8IUE1 241 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 TMEM252Q8N6L7 170 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 OR13D1Q8NGV5 346 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 RBKSQ9H477 322 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 C7orf69Q9H7B7 122 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 AUP1Q9Y679 476 aa14.1□□□□□ -0.15
SRSF1-201ENST00000258962 TRAV3A0A0B4J244 114 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 IGHV2-70DA0A0C4DH43 119 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 APOA2P02652 100 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 IAPPP10997 89 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 PRTN3P24158 256 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 CAV2P51636 162 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 OR2B8PP59922 312 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 RELBQ01201 579 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 TAGLNQ01995 201 aaKnown RBP14.09□□□□□ -0.15
SRSF1-201ENST00000258962 BAXQ07812 192 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 KLRD1Q13241 179 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 OR11H6Q8NGC7 330 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 RHOVQ96L33 236 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 PCGF1Q9BSM1 259 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 QTRT1Q9BXR0 403 aaKnown RBP14.09□□□□□ -0.15
SRSF1-201ENST00000258962 SMIM3Q9BZL3 60 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 MMP26Q9NRE1 261 aa14.09□□□□□ -0.15
SRSF1-201ENST00000258962 LY6LH3BQJ8 138 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 LY86O95711 162 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 RRASP10301 218 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 UBE2KP61086 200 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 LDLRAD2Q5SZI1 272 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 RPL7L1Q6DKI1 246 aaKnown RBP14.08□□□□□ -0.16
SRSF1-201ENST00000258962 OR4A47Q6IF82 309 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 C1orf122Q6ZSJ8 110 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 RNF141Q8WVD5 230 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 SIRPDQ9H106 197 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 WFDC1Q9HC57 220 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 WSB1Q9Y6I7 421 aa14.08□□□□□ -0.16
SRSF1-201ENST00000258962 SRRM4A7MD48 611 aaKnown RBP14.07□□□□□ -0.16
SRSF1-201ENST00000258962 H3BP45 60 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 TXNL1O43396 289 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 HRASP01112 189 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 IL6RP08887 468 aaPredicted RBP14.07□□□□□ -0.16
SRSF1-201ENST00000258962 NMBP08949 121 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 TAS2R30P59541 319 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 TMEM177Q53S58 311 aa14.07□□□□□ -0.16
SRSF1-201ENST00000258962 VMO1Q7Z5L0 202 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms