RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 GATAD1Q8WUU5 269 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 TAF15Q92804 592 aaKnown RBP eCLIP10.8□□□□□ -0.68
THSD1-201ENST00000258613 C2orf88Q9BSF0 95 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 SLC25A22Q9H936 323 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 KPTNQ9Y664 436 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 PMS2P5A8MQ11 134 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 PPIHO43447 177 aaKnown RBP10.8□□□□□ -0.68
THSD1-201ENST00000258613 USF2Q15853 346 aaPredicted RBP10.8□□□□□ -0.68
THSD1-201ENST00000258613 C16orf54Q6UWD8 224 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 RPP25LQ8N5L8 163 aaKnown RBP10.8□□□□□ -0.68
THSD1-201ENST00000258613 HINT2Q9BX68 163 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 PRO1933Q9H354 126 aa10.8□□□□□ -0.68
THSD1-201ENST00000258613 KBTBD11-OT1A0A1B0GTJ5 212 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 A0A1W2PR64 198 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 FAM90A27PA6NNH2 459 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 RRHO14718 337 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 SOX15O60248 233 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 RAB4BP61018 213 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 CLDND2Q8NHS1 167 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 PBDC1Q9BVG4 233 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 JPT1Q9UK76 154 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 SPG11Q96JI7 2443 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 CELSR1Q9NYQ6 3014 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 C17orf100A8MU93 164 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 YPEL1O60688 119 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 SCAF4O95104 1147 aaKnown RBP10.79□□□□□ -0.68
THSD1-201ENST00000258613 IGKV1-16P04430 117 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 SRP19P09132 144 aaKnown RBP10.79□□□□□ -0.68
THSD1-201ENST00000258613 GATA4P43694 442 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
THSD1-201ENST00000258613 ZNF66Q6ZN08 573 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 C1orf174Q8IYL3 243 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 FAM24BQ8N5W8 94 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 YPEL2Q96QA6 119 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
THSD1-201ENST00000258613 A0A087X0M5 115 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 TRGV10A0A0A0MS01 117 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 A0A1B0GX30 115 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 SMCO3A2RU48 225 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 F2RL2O00254 374 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 RAB29O14966 203 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 FGF7P21781 194 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 DDTP30046 118 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 DIAPH2-AS1Q14236 149 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 SP5Q6BEB4 398 aaPredicted RBP10.78□□□□□ -0.68
THSD1-201ENST00000258613 ZNF787Q6DD87 383 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 ZNF788Q6ZQV5 615 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 ZNF561Q8N587 486 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 H1FXQ92522 213 aaKnown RBP10.78□□□□□ -0.68
THSD1-201ENST00000258613 S1PR3Q99500 378 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 OR6C3Q9NZP0 311 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 C15orf62A8K5M9 175 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 IRF2P14316 349 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 TLE4Q04727 773 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 FAM222BQ8WU58 562 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 SDSLQ96GA7 329 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 SAP30LQ9HAJ7 183 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 TMEM140Q9NV12 185 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 KIAA1456Q9P272 454 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 URGCP-MRPS24S4R325 110 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 PKD1L2Q7Z442 2459 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 VPS13CQ709C8 3753 aa10.78□□□□□ -0.68
THSD1-201ENST00000258613 E7EQL1 145 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 H3BQ15 152 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 IFNA10P01566 189 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 IGHV2-5P01817 119 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 TNFSF4P23510 183 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.68
THSD1-201ENST00000258613 RAB11AP62491 216 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 MRPS11P82912 194 aaKnown RBP10.77□□□□□ -0.68
THSD1-201ENST00000258613 OR10P1Q8NGE3 313 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 FAM122AQ96E09 287 aa10.77□□□□□ -0.68
THSD1-201ENST00000258613 GFRA3O60609 400 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 LY6HO94772 140 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 SNRPCP09234 159 aaKnown RBP10.77□□□□□ -0.69
THSD1-201ENST00000258613 ZNF343Q6P1L6 599 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 CLEC2AQ6UVW9 174 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 COMMD1Q8N668 190 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 OR4A16Q8NH70 328 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 TMEM170AQ8WVE7 144 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 FOLR2P14207 255 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 ZCCHC14Q8WYQ9 949 aaKnown RBP10.77□□□□□ -0.69
THSD1-201ENST00000258613 HEYLQ9NQ87 328 aaPredicted RBP10.77□□□□□ -0.69
THSD1-201ENST00000258613 SLC25A10Q9UBX3 287 aaPredicted RBP10.77□□□□□ -0.69
THSD1-201ENST00000258613 ZNF835Q9Y2P0 537 aa10.77□□□□□ -0.69
THSD1-201ENST00000258613 SRRM4A7MD48 611 aaKnown RBP10.76□□□□□ -0.69
THSD1-201ENST00000258613 HPRT1P00492 218 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 RELBQ01201 579 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 CR1LQ2VPA4 569 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 LFNGQ8NES3 379 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 RAB39BQ96DA2 213 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 MAP1LC3B2A6NCE7 125 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 SHISA9B4DS77 424 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 FAM90A26D6RGX4 464 aa10.76□□□□□ -0.69
THSD1-201ENST00000258613 RPL31P62899 125 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms