RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 LYG1Q8N1E2 194 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 RCC1LQ96I51 464 aaKnown RBP9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 PSMG3-AS1Q96PY0 264 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 AIFM2Q9BRQ8 373 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 TUBA4BQ9H853 241 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 LINC00574Q9H8X3 128 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 SAP30LQ9HAJ7 183 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 AKAP6Q13023 2319 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 DSCAMO60469 2012 aa9.37□□□□□ -0.91
CLUHP3-201ENST00000254109 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 LOC102723971A0A1B0GUV8 181 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 A0A1W2PPE3 182 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 B9A039 149 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 C17orf112F2Z3M2 114 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 IFNA1P01562 189 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 AKR1C3P42330 323 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 AVPI1Q5T686 147 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 ETV3LQ6ZN32 361 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 DDB2Q92466 427 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 GAL3ST2Q9H3Q3 398 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 DYNLRB1Q9NP97 96 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 SLC39A9Q9NUM3 307 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 TMEM140Q9NV12 185 aa9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 SLC25A10Q9UBX3 287 aaPredicted RBP9.36□□□□□ -0.91
CLUHP3-201ENST00000254109 PPIAL4EA0A075B759 164 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 COLCA2A8K830 154 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 PPIAL4DF5H284 164 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 IFNA10P01566 189 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 PPIAL4FP0DN26 164 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 CTRB1P17538 263 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 MEF2CQ06413 473 aaPredicted RBP9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 CTRB2Q6GPI1 263 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 TGIF2LYQ8IUE0 185 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 OR10A7Q8NGE5 316 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 HEYLQ9NQ87 328 aaPredicted RBP9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 PPIAL4AQ9Y536 164 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 CRYBG3Q68DQ2 2970 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 ZFP92A6NM28 416 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 H3BQ15 152 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 BCL2P10415 239 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 GNG10P50151 68 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 RELBQ01201 579 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF726P1Q15940 193 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 PDLIM3Q53GG5 364 aaPredicted RBP9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 C11orf71Q6IPW1 123 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 TCF23Q7RTU1 214 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF429Q86V71 674 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 VKORC1L1Q8N0U8 176 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF439Q8NDP4 499 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 NIPSNAP3BQ9BS92 247 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 CBLN4Q9NTU7 201 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 DCAF16Q9NXF7 216 aa9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 RPUSD1Q9UJJ7 312 aaKnown RBP9.35□□□□□ -0.91
CLUHP3-201ENST00000254109 C15orf62A8K5M9 175 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 TMEM178BH3BS89 294 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 HRASP01112 189 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 CRYBA1P05813 215 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 DAOP14920 347 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 FGF8P55075 233 aaPredicted RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 RPS16P62249 146 aaKnown RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 RAB11AP62491 216 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 FFAR4Q5NUL3 377 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 RBMS3Q6XE24 437 aaKnown RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 CYB561D1Q8N8Q1 229 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 OR10G9Q8NGN4 311 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 OR10G7Q8NGN6 311 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 CCL17Q92583 94 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 LHX4Q969G2 390 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 ZNF251Q9BRH9 671 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 NPCDR1Q9BY65 106 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 ACTR3CQ9C0K3 210 aaPredicted RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 MS4A5Q9H3V2 200 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 FASNP49327 2511 aaKnown RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 GCN1Q92616 2671 aaKnown RBP9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 DYSFO75923 2080 aa9.34□□□□□ -0.91
CLUHP3-201ENST00000254109 NDUFB3O43676 98 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 TSPAN9O75954 239 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 GOSR1O95249 250 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 MT-ND4LP03901 98 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 ARG1P05089 322 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 FBP1P09467 338 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 FOLR2P14207 255 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 CD1BP29016 333 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 HOXA1P49639 335 aaPredicted RBP9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 RPL31P62899 125 aaKnown RBP9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 HNF4GQ14541 408 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 RTL8BQ17RB0 113 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 UTF1Q5T230 341 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 ACSM6Q6P461 480 aa9.33□□□□□ -0.92
CLUHP3-201ENST00000254109 C1orf229Q6ZS94 237 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms