RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 VAMP8Q9BV40 100 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 PSPNO60542 156 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 WT1P19544 449 aaPredicted RBP15.74■□□□□ 0.11
SNX4-201ENST00000251775 TIMP3P35625 211 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 BRWD1-AS2P59051 145 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
SNX4-201ENST00000251775 BATFQ16520 125 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 ZNF826PQ6ZT77 177 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 CXorf67Q86X51 503 aaPredicted RBP15.74■□□□□ 0.11
SNX4-201ENST00000251775 ZNF645Q8N7E2 425 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 RAB1CQ92928 201 aa15.74■□□□□ 0.11
SNX4-201ENST00000251775 HAND1O96004 215 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 VWA1Q6PCB0 445 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 WNT9BO14905 357 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 CRISP2P16562 243 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 HNF1AP20823 631 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 KIR2DL2P43627 348 aaPredicted RBP15.73■□□□□ 0.11
SNX4-201ENST00000251775 EIF4EBP1Q13541 118 aaPredicted RBP15.73■□□□□ 0.11
SNX4-201ENST00000251775 PIP4P1Q86T03 277 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 C11orf53Q8IXP5 236 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 WDR31Q8NA23 367 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 OR10G8Q8NGN5 311 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 OR2D2Q9H210 308 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 OBP2BQ9NPH6 170 aa15.73■□□□□ 0.11
SNX4-201ENST00000251775 C17orf98A8MV24 154 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 F2Z2F3 143 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 DMRTA1Q5VZB9 504 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 FAM53AQ6NSI3 398 aaPredicted RBP15.72■□□□□ 0.11
SNX4-201ENST00000251775 ZNF808Q8N4W9 903 aaPredicted RBP15.72■□□□□ 0.11
SNX4-201ENST00000251775 C9orf106Q8NAJ2 232 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 OR5AU1Q8NGC0 362 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 OCC1Q8TAD7 63 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 CIB3Q96Q77 187 aaPredicted RBP15.72■□□□□ 0.11
SNX4-201ENST00000251775 MRPL18Q9H0U6 180 aaKnown RBP15.72■□□□□ 0.11
SNX4-201ENST00000251775 HES4Q9HCC6 221 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 USF3Q68DE3 2245 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 THBS3P49746 956 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 DEFB124Q8NES8 71 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 WDR83OSQ9Y284 106 aa15.72■□□□□ 0.11
SNX4-201ENST00000251775 SPAARA0A1B0GVQ0 90 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 IGKV3-15P01624 115 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 EDDM3BP56851 147 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 OR5I1Q13606 314 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 TMEM204Q9BSN7 226 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 RNF114Q9Y508 228 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 SCO2A0A1W2PP80 73 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 C15orf62A8K5M9 175 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 TFF1P04155 84 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 TFPI2P48307 235 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 ZBTB34Q8NCN2 500 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 OPN3Q9H1Y3 402 aaPredicted RBP15.71■□□□□ 0.11
SNX4-201ENST00000251775 CHODLQ9H9P2 273 aa15.71■□□□□ 0.11
SNX4-201ENST00000251775 CACNA1DQ01668 2161 aa15.71■□□□□ 0.1
SNX4-201ENST00000251775 A0A1W2PPV4 95 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 ZNF90Q03938 601 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 FOXF2Q12947 444 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 QTRT1Q9BXR0 403 aaKnown RBP15.7■□□□□ 0.1
SNX4-201ENST00000251775 ASCL3Q9NQ33 180 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 LOC400499M0QZD8 3231 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 RAB29O14966 203 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 CLDN14O95500 239 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 FTH1P19P0C7X4 201 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 ARL14EPLP0DKL9 152 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 CD1BP29016 333 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 IGFL2Q6UWQ7 119 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 IL36BQ9NZH7 164 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 PRRC2CQ9Y520 2896 aaKnown RBP15.7■□□□□ 0.1
SNX4-201ENST00000251775 CACNA1HO95180 2353 aa15.7■□□□□ 0.1
SNX4-201ENST00000251775 INTS1Q8N201 2190 aaKnown RBP15.69■□□□□ 0.1
SNX4-201ENST00000251775 HLA-DRB5Q30154 266 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 BAGE3Q86Y29 109 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 BAGE2Q86Y30 109 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 FZR1Q9UM11 496 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 TMEM30CPA0ZSE6 113 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 SLC17A3O00476 420 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 AQP7O14520 342 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 RBMXL2O75526 392 aaKnown RBP15.69■□□□□ 0.1
SNX4-201ENST00000251775 FRMD6-AS1P0C7T7 363 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 AESQ08117 197 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 KRTCAP3Q53RY4 240 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 PRAMEF6Q5VXH4 476 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 H2BFWTQ7Z2G1 175 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 FBXL7Q9UJT9 491 aa15.69■□□□□ 0.1
SNX4-201ENST00000251775 CACNA1GO43497 2377 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 TRAV9-1A0A075B6T8 112 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 C12orf77C9JDV5 145 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 K7EN84 100 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 PCP4P48539 62 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 Q0VG73 95 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 Q6ZR03 302 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 Q8N976 141 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 OR1L6Q8NGR2 347 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 TXNDC17Q9BRA2 123 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 SAMD10Q9BYL1 202 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 KCNIP1Q9NZI2 227 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 RRHO14718 337 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 CECR9P0C854 216 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 HOXC12P31275 282 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 CATR1Q13166 79 aa15.68■□□□□ 0.1
SNX4-201ENST00000251775 COL5A1-AS1Q5SY13 56 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms