RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 CCL3L1P16619 93 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 TAGLN2P37802 199 aaKnown RBP17.78■□□□□ 0.44
CLN6-201ENST00000249806 FAM90A2PQ658T7 463 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 SLC25A48Q6ZT89 311 aaKnown RBP17.78■□□□□ 0.44
CLN6-201ENST00000249806 Q8N7P7 452 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 ZNF709Q8N972 641 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 TMEM170AQ8WVE7 144 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 VKORC1Q9BQB6 163 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 NIPSNAP3BQ9BS92 247 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 TCF19Q9Y242 345 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 PPIAL4AQ9Y536 164 aa17.78■□□□□ 0.44
CLN6-201ENST00000249806 hCG_1809904A0A1W2PP81 198 aa17.77■□□□□ 0.44
CLN6-201ENST00000249806 A0A1W2PR64 198 aa17.77■□□□□ 0.44
CLN6-201ENST00000249806 A0A1W2PRV1 198 aa17.77■□□□□ 0.44
CLN6-201ENST00000249806 FOLR2P14207 255 aa17.77■□□□□ 0.44
CLN6-201ENST00000249806 LYPD2Q6UXB3 125 aa17.77■□□□□ 0.44
CLN6-201ENST00000249806 NBASA2RRP1 2371 aa17.77■□□□□ 0.43
CLN6-201ENST00000249806 CT45A6P0DMU7 189 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 CT45A5P0DMU8 189 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 CT45A7P0DMV0 189 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 MYOD1P15172 320 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 HABP2Q14520 560 aaPredicted RBP17.76■□□□□ 0.43
CLN6-201ENST00000249806 PDLIM3Q53GG5 364 aaPredicted RBP17.76■□□□□ 0.43
CLN6-201ENST00000249806 TVP23CQ96ET8 276 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 SPTBN4Q9H254 2564 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 C15orf61A6NNL5 157 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 OR2C1O95371 312 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 IGKV1-16P04430 117 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 SSX8Q7RTT4 187 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 TMEM106BQ9NUM4 274 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 VAX2Q9UIW0 290 aa17.76■□□□□ 0.43
CLN6-201ENST00000249806 SMCO3A2RU48 225 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 VSTM5A8MXK1 200 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 HOXA1P49639 335 aaPredicted RBP17.75■□□□□ 0.43
CLN6-201ENST00000249806 TMPRSS3P57727 454 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 NCMAPQ5T1S8 102 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 TMEM200BQ69YZ2 307 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 C1orf87Q8N0U7 546 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 NGBQ9NPG2 151 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 WDR83OSQ9Y284 106 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 RAXQ9Y2V3 346 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 CTXND1A0A1B0GTU2 59 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 MBP02144 154 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 RPP30P78346 268 aaKnown RBP17.75■□□□□ 0.43
CLN6-201ENST00000249806 RAB24Q969Q5 203 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 ADTRPQ96IZ2 230 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 DYNLRB1Q9NP97 96 aa17.75■□□□□ 0.43
CLN6-201ENST00000249806 RAB5AP20339 215 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 RNF212Q495C1 297 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 GCSAMLQ5JQS6 135 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 H1FXQ92522 213 aaKnown RBP17.74■□□□□ 0.43
CLN6-201ENST00000249806 TMEM14BQ9NUH8 114 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 LRBAP50851 2863 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 ATRXP46100 2492 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 SRRM4A7MD48 611 aaKnown RBP17.74■□□□□ 0.43
CLN6-201ENST00000249806 PRSS46E5RG02 174 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 C17orf112F2Z3M2 114 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 GATAD1Q8WUU5 269 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 GAL3ST2Q9H3Q3 398 aa17.74■□□□□ 0.43
CLN6-201ENST00000249806 LY86O95711 162 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 PLAUP00749 431 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 IFNA4P05014 189 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 MEF2CQ06413 473 aaPredicted RBP17.73■□□□□ 0.43
CLN6-201ENST00000249806 TREML4Q6UXN2 200 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 SLC35E3Q7Z769 313 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 LINC01560Q8TB33 94 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 ZNF714Q96N38 554 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 ACTR3CQ9C0K3 210 aaPredicted RBP17.73■□□□□ 0.43
CLN6-201ENST00000249806 PRELID1Q9Y255 219 aa17.73■□□□□ 0.43
CLN6-201ENST00000249806 TNFRSF13BO14836 293 aaPredicted RBP17.72■□□□□ 0.43
CLN6-201ENST00000249806 CD81P60033 236 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 HSPE1P61604 102 aaKnown RBP17.72■□□□□ 0.43
CLN6-201ENST00000249806 OR13D1Q8NGV5 346 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 YPEL4Q96NS1 127 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 P2RX4Q99571 388 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 HINT2Q9BX68 163 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 SLC35D1Q9NTN3 355 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 FOXA2Q9Y261 457 aaPredicted RBP17.72■□□□□ 0.43
CLN6-201ENST00000249806 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.72■□□□□ 0.43
CLN6-201ENST00000249806 C1orf196B1AJZ1 125 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 HRASP01112 189 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 IFNA1P01562 189 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 OPN1MWP04001 364 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 OPN1MW2P0DN77 364 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 OPN1MW3P0DN78 364 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 RAB5BP61020 215 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 HEPN1Q6WQI6 88 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 RBMS3Q6XE24 437 aaKnown RBP17.72■□□□□ 0.43
CLN6-201ENST00000249806 IQCF2Q8IXL9 164 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 MS4A5Q9H3V2 200 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 BIN3Q9NQY0 253 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 CTSZQ9UBR2 303 aa17.72■□□□□ 0.43
CLN6-201ENST00000249806 NHLH1Q02575 133 aa17.71■□□□□ 0.43
CLN6-201ENST00000249806 PMS2P11Q13670 270 aa17.71■□□□□ 0.43
CLN6-201ENST00000249806 TMEM30BQ3MIR4 351 aa17.71■□□□□ 0.43
CLN6-201ENST00000249806 NDUFB3O43676 98 aa17.71■□□□□ 0.43
CLN6-201ENST00000249806 NDUFA2O43678 99 aa17.71■□□□□ 0.43
CLN6-201ENST00000249806 GRNP28799 593 aaKnown RBP17.71■□□□□ 0.43
CLN6-201ENST00000249806 MEF2BQ02080 365 aaPredicted RBP17.71■□□□□ 0.43
CLN6-201ENST00000249806 ZNF343Q6P1L6 599 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms