RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 MS4A7Q9GZW8 240 aaPredicted RBP11.49□□□□□ -0.57
SDF2-201ENST00000247020 NUP50Q9UKX7 468 aa11.49□□□□□ -0.57
SDF2-201ENST00000247020 STRAPQ9Y3F4 350 aaKnown RBP11.49□□□□□ -0.57
SDF2-201ENST00000247020 SRRM4A7MD48 611 aaKnown RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 ATP6V1G1O75348 118 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 KBTBD11O94819 623 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 SAA1P0DJI8 122 aaPredicted RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 HOXB4P17483 251 aaPredicted RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 DYNLT3P51808 116 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 DVL1P1P54792 670 aaPredicted RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 OR2B8PP59922 312 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 RPS16P62249 146 aaKnown RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 VMA21Q3ZAQ7 101 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 LRRC75A-AS1Q8N1F1 130 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 OR5C1Q8NGR4 320 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 OR5B3Q8NH48 314 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 TMEM167AQ8TBQ9 72 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 PERPQ96FX8 193 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 ATP5SQ99766 215 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 GINS3Q9BRX5 216 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 SMIM3Q9BZL3 60 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 BEX4Q9NWD9 120 aaPredicted RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 TCF19Q9Y242 345 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
SDF2-201ENST00000247020 COL12A1Q99715 3063 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 ARHGAP32A7KAX9 2087 aa11.48□□□□□ -0.57
SDF2-201ENST00000247020 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 TOX4O94842 621 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 NMBP08949 121 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 SEC11BP0C7V7 166 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 CD1BP29016 333 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 HABP2Q14520 560 aaPredicted RBP11.47□□□□□ -0.57
SDF2-201ENST00000247020 ATP6V1FQ16864 119 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 SPANXN5Q5MJ07 72 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 CCDC144NLQ6NUI1 221 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 BSCL2Q96G97 398 aaPredicted RBP11.47□□□□□ -0.57
SDF2-201ENST00000247020 TSNAXQ99598 290 aaKnown RBP11.47□□□□□ -0.57
SDF2-201ENST00000247020 PARD6GQ9BYG4 376 aaPredicted RBP11.47□□□□□ -0.57
SDF2-201ENST00000247020 WFDC1Q9HC57 220 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 MED9Q9NWA0 146 aa11.47□□□□□ -0.57
SDF2-201ENST00000247020 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 TRAV3A0A0B4J244 114 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 A0A1W2PPI3 338 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 H3BP45 60 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 CST7O76096 145 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 IGLV2-23P01705 113 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 VDAC2P45880 294 aaPredicted RBP11.46□□□□□ -0.57
SDF2-201ENST00000247020 UBE2E1P51965 193 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 DLX1P56177 255 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 ATP5IP56385 69 aaPredicted RBP11.46□□□□□ -0.57
SDF2-201ENST00000247020 PDZD9Q8IXQ8 264 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 TEX45Q8NA69 505 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 ZDHHC16Q969W1 377 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 LPAR2Q9HBW0 351 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 MMP26Q9NRE1 261 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 OR51B2Q9Y5P1 312 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 AUP1Q9Y679 476 aa11.46□□□□□ -0.57
SDF2-201ENST00000247020 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.57
SDF2-201ENST00000247020 FAM157AC9JC47 383 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 RNASEK-C17orf49H0YIS7 233 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 FGF16O43320 207 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 PRCDQ00LT1 54 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 TMEM267Q0VDI3 215 aaPredicted RBP11.45□□□□□ -0.58
SDF2-201ENST00000247020 CLEC9AQ6UXN8 241 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 PINX1Q96BK5 328 aaKnown RBP11.45□□□□□ -0.58
SDF2-201ENST00000247020 ENY2Q9NPA8 101 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 IFNA5P01569 189 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 OR8U8P0C7N1 319 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 METTL15P1P0C7V9 234 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 SPP1P10451 314 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 MAS1LP35410 378 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 HOXA1P49639 335 aaPredicted RBP11.45□□□□□ -0.58
SDF2-201ENST00000247020 LGALS4P56470 323 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 RPL8P62917 257 aaKnown RBP11.45□□□□□ -0.58
SDF2-201ENST00000247020 PAX8Q06710 450 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 KLRD1Q13241 179 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 CLINT1Q14677 625 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 CLEC12BQ2HXU8 276 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 TMEM217Q8N7C4 229 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 TMED6Q8WW62 240 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 GNPNAT1Q96EK6 184 aaPredicted RBP11.45□□□□□ -0.58
SDF2-201ENST00000247020 C1orf159Q96HA4 380 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 OR4C12Q96R67 309 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 TBX15Q96SF7 602 aa11.45□□□□□ -0.58
SDF2-201ENST00000247020 PMS2P5A8MQ11 134 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 SULT1A2P50226 295 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 SLC7A5P1Q8MH63 180 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 LILRB2Q8N423 598 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 OR10P1Q8NGE3 313 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 CFHR4Q92496 578 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 SAT2Q96F10 170 aaPredicted RBP11.44□□□□□ -0.58
SDF2-201ENST00000247020 COMMD5Q9GZQ3 224 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 HEYLQ9NQ87 328 aaPredicted RBP11.44□□□□□ -0.58
SDF2-201ENST00000247020 LRRK2Q5S007 2527 aa11.44□□□□□ -0.58
SDF2-201ENST00000247020 AKAP6Q13023 2319 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms