RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RAB14P61106 215 aa15.16■□□□□ 0.02
TNFSF9-201ENST00000245817 CLEC9AQ6UXN8 241 aa15.16■□□□□ 0.02
TNFSF9-201ENST00000245817 ZNF429Q86V71 674 aa15.16■□□□□ 0.02
TNFSF9-201ENST00000245817 FKBP11Q9NYL4 201 aa15.16■□□□□ 0.02
TNFSF9-201ENST00000245817 BET1LQ9NYM9 111 aa15.16■□□□□ 0.02
TNFSF9-201ENST00000245817 APCP25054 2843 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 IGHV3-72A0A0B4J1Y9 119 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 A0A1W2PRD5 423 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 A0A1W2PRF3 423 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 A0A1W2PRM7 423 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 IGSF23A1L1A6 192 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 C15orf61A6NNL5 157 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 SRRM4A7MD48 611 aaKnown RBP15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 ODF3BA8MYP8 253 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 H3BP45 60 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 SAA1P0DJI8 122 aaPredicted RBP15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 LGALS7P47929 136 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 DEFB113Q30KQ7 82 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 VMA21Q3ZAQ7 101 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 SPANXN5Q5MJ07 72 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 HCP5Q6MZN7 132 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 ALKAL2Q6UX46 152 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 STOML3Q8TAV4 291 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 CYTL1Q9NRR1 136 aa15.15■□□□□ 0.02
TNFSF9-201ENST00000245817 ASH1LQ9NR48 2969 aaKnown RBP15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 TRAV3A0A0B4J244 114 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 RNASEK-C17orf49H0YIS7 233 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 UPK2O00526 184 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 RPP30P78346 268 aaKnown RBP15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 NDUFA5Q16718 116 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 AARDQ4LEZ3 155 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 MINOS1Q5TGZ0 78 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 BAP18Q8IXM2 172 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 LRRC75A-AS1Q8N1F1 130 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 SCARB1Q8WTV0 552 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 PHYHIPLQ96FC7 376 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 HIPK2Q9H2X6 1198 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 ENY2Q9NPA8 101 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 ITGB1BP2Q9UKP3 347 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 FOXA2Q9Y261 457 aaPredicted RBP15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 HILPDAQ9Y5L2 63 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 MINOS1-NBL1R4GNA1 71 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 CSMD2Q7Z408 3487 aa15.14■□□□□ 0.01
TNFSF9-201ENST00000245817 CST7O76096 145 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 HTR2BP41595 481 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 SULT1A1P50225 295 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 UBE2E1P51965 193 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 SPINK9Q5DT21 86 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 CCDC144NLQ6NUI1 221 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 OR4A5Q8NH83 315 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 ZDHHC16Q969W1 377 aa15.13■□□□□ 0.01
TNFSF9-201ENST00000245817 FGF2P09038 288 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 HSPE1P61604 102 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 RPL7L1Q6DKI1 246 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 PUSL1Q8N0Z8 303 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TMEM217Q8N7C4 229 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 OR1S2Q8NGQ3 325 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 RBMXL1Q96E39 390 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TBX15Q96SF7 602 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TMEM14BQ9NUH8 114 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 STRAPQ9Y3F4 350 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 OR51B2Q9Y5P1 312 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 ITPR2Q14571 2701 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 OOSP1A8MZH6 123 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 KBTBD11O94819 623 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 HOXA1P49639 335 aaPredicted RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 HBG1P69891 147 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 HBG2P69892 147 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TMEM267Q0VDI3 215 aaPredicted RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 ZNF266Q14584 549 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 EIF5AL1Q6IS14 154 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 LHFPL4Q7Z7J7 247 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 OR5C1Q8NGR4 320 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TSNAXQ99598 290 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 HEYLQ9NQ87 328 aaPredicted RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TCF19Q9Y242 345 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 TBL2Q9Y4P3 447 aaKnown RBP15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 ARHGAP32A7KAX9 2087 aa15.12■□□□□ 0.01
TNFSF9-201ENST00000245817 POLQO75417 2590 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 B4DSR2 109 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 MSMBP08118 114 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 IL6RP08887 468 aaPredicted RBP15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 METTL15P1P0C7V9 234 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 DYNLT3P51808 116 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 PAX8Q06710 450 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 CLINT1Q14677 625 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 PDLIM3Q53GG5 364 aaPredicted RBP15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 BSCL2Q96G97 398 aaPredicted RBP15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 RNF5Q99942 180 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 ZNF257Q9Y2Q1 563 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 CSMD1Q96PZ7 3565 aa15.11■□□□□ 0.01
TNFSF9-201ENST00000245817 A0A1W2PPI3 338 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 TIMM23O14925 209 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 CD1BP29016 333 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 RPL8P62917 257 aaKnown RBP15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 SSX2Q16385 188 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 UBAC2Q8NBM4 344 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 HINT2Q9BX68 163 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 COMMD5Q9GZQ3 224 aa15.1■□□□□ 0.01
TNFSF9-201ENST00000245817 DFFBO76075 338 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms