RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 ITGB1BP1O14713 200 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 RBFOX2O43251 390 aaKnown RBP eCLIP6.48□□□□□ -1.37
CXCR4-201ENST00000241393 EIF3GO75821 320 aaKnown RBP eCLIP6.48□□□□□ -1.37
CXCR4-201ENST00000241393 WISP2O76076 250 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 CGAP01215 116 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 GZMHP20718 246 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 RND2P52198 227 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 GNB2P62879 340 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 RPL30P62888 115 aaKnown RBP6.48□□□□□ -1.37
CXCR4-201ENST00000241393 AESQ08117 197 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF726P1Q15940 193 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 Q6ZR03 302 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 OR10P1Q8NGE3 313 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 CA5BP1Q8WTZ4 195 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 TCTEX1D2Q8WW35 142 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 C5orf30Q96GV9 206 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 PIMREGQ9BSJ6 248 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 SCNM1Q9BWG6 230 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 MAP1LC3BQ9GZQ8 125 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 RAB9BQ9NP90 201 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF71Q9NQZ8 489 aaPredicted RBP6.48□□□□□ -1.37
CXCR4-201ENST00000241393 JPT1Q9UK76 154 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 PROCRQ9UNN8 238 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 CFAP54Q96N23 3096 aa6.48□□□□□ -1.37
CXCR4-201ENST00000241393 TTC28Q96AY4 2481 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 IGHV1-18A0A0C4DH31 117 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 CTXND1A0A1B0GTU2 59 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 PMS2P5A8MQ11 134 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 SRRM5B3KS81 715 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM250H0YL14 139 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 C15orf65H3BRN8 121 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 WNT9BO14905 357 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 RAMP3O60896 148 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF737O75373 536 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 TNFSF13O75888 250 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 S1PR2O95136 353 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 CYB5R3P00387 301 aaPredicted RBP6.47□□□□□ -1.37
CXCR4-201ENST00000241393 KRASP01116 189 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 G6PCP35575 357 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 CEBPDP49716 269 aaPredicted RBP6.47□□□□□ -1.37
CXCR4-201ENST00000241393 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 ELOBQ15370 118 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 TMEM249Q2WGJ8 235 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 PRAMEF6Q5VXH4 476 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF826PQ6ZT77 177 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 BHLHA15Q7RTS1 189 aaPredicted RBP6.47□□□□□ -1.37
CXCR4-201ENST00000241393 H2BFWTQ7Z2G1 175 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 WDFY3Q8IZQ1 3526 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 UBALD1Q8TB05 177 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 MRGPRDQ8TDS7 321 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 DTD1Q8TEA8 209 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 STARD4Q96DR4 205 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF665Q9H7R5 613 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 SLC39A9Q9NUM3 307 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 GAB2Q9UQC2 676 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 SLC25A15Q9Y619 301 aa6.47□□□□□ -1.37
CXCR4-201ENST00000241393 UBE2L5PA0A1B0GUS4 154 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 C17orf98A8MV24 154 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 CLDN34H7C241 214 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 YPEL1O60688 119 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 MDKP21741 143 aaPredicted RBP6.46□□□□□ -1.37
CXCR4-201ENST00000241393 PRDX2P32119 198 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 KIR2DS2P43631 304 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 BRWD1-AS2P59051 145 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 RAB11AP62491 216 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 PDLIM3Q53GG5 364 aaPredicted RBP6.46□□□□□ -1.37
CXCR4-201ENST00000241393 LCN15Q6UWW0 184 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 IGFL3Q6UXB1 125 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 OR13A1Q8NGR1 328 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 OR52E5Q8NH55 327 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 LRRC29Q8WV35 223 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 LHX4Q969G2 390 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 YPEL2Q96QA6 119 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 ZNF251Q9BRH9 671 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 GGACTQ9BVM4 153 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 VSIRQ9H7M9 311 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 SDF2L1Q9HCN8 221 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 MANBALQ9NQG1 85 aa6.46□□□□□ -1.37
CXCR4-201ENST00000241393 VPS13AQ96RL7 3174 aa6.46□□□□□ -1.38
CXCR4-201ENST00000241393 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 A0A1W2PPE3 182 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZFP92A6NM28 416 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 C17orf112F2Z3M2 114 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 MPDU1O75352 247 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 HPRT1P00492 218 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 IGHV3-13P01766 116 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 OPN1MWP04001 364 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 OPN1MW2P0DN77 364 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 OPN1MW3P0DN78 364 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 GPR12P47775 334 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 FABP6P51161 128 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CEBPGP53567 150 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 OR2B8PP59922 312 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 CTAG1AP78358 180 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 MEF2BQ02080 365 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 ZNF816Q0VGE8 651 aaPredicted RBP6.45□□□□□ -1.38
CXCR4-201ENST00000241393 TIMM23BQ5SRD1 257 aa6.45□□□□□ -1.38
CXCR4-201ENST00000241393 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms