RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 LRRC37AA6NMS7 1700 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 IGKV3D-15A0A087WSY6 115 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 A1L4Q6 167 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 IGKV3-15P01624 115 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 PSG2P11465 335 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 RPL29P47914 159 aaKnown RBP6.36□□□□□ -1.39
MED28-201ENST00000237380 ACSF3Q4G176 576 aaPredicted RBP6.36□□□□□ -1.39
MED28-201ENST00000237380 SPINK9Q5DT21 86 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 LINC01356Q8N9X3 169 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 ERVH48-1M5A8F1 160 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 AMY1AP04745 511 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 ZP1P60852 638 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 H3BMH7 237 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 SPINT1O43278 529 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 BSPH1Q075Z2 132 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 KIAA1644Q3SXP7 199 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 STPG2Q8N412 459 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 TMEM37Q8WXS4 190 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 SPSB4Q96A44 273 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 TRGV4A0A0C4DH28 118 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 XAF1Q6GPH4 301 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 PSMB11A5LHX3 300 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 OR2W5A6NFC9 320 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 CCL28Q9NRJ3 127 aa6.36□□□□□ -1.39
MED28-201ENST00000237380 A0A0J9YW62 118 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 CT62P0C5K7 136 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 PRSS41Q7RTY9 318 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 SIGLEC12Q96PQ1 595 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 NPIPB9F8W1W9 429 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 NPIPB7O75200 414 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 CD74P04233 296 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 THBDP07204 575 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 AANATQ16613 207 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 MEGF10Q96KG7 1140 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 RHOVQ96L33 236 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 MARVELD1Q9BSK0 173 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 MRM2Q9UI43 246 aaKnown RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 GREB1LQ9C091 1923 aaPredicted RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 TP53BP1Q12888 1972 aaPredicted RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 EIF3GO75821 320 aaKnown RBP eCLIP6.35□□□□□ -1.39
MED28-201ENST00000237380 USMG5Q96IX5 58 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 SUCLG1P53597 346 aaKnown RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 CBLN3Q6UW01 205 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 C17orf100A8MU93 164 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 F12P00748 615 aaPredicted RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 ST6GALNAC3Q8NDV1 305 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 UCN2Q96RP3 112 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 POLR2IP36954 125 aaKnown RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 SLC25A47Q6Q0C1 308 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 CELF2-AS1Q8N7Q2 184 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 FRRS1LQ9P0K9 344 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 FANCMQ8IYD8 2048 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 ASCC3Q8N3C0 2202 aaKnown RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 IFI27P40305 119 aaPredicted RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 EFNA4P52798 201 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 EWSR1Q01844 656 aaKnown RBP eCLIP6.35□□□□□ -1.39
MED28-201ENST00000237380 TBL2Q9Y4P3 447 aaKnown RBP6.35□□□□□ -1.39
MED28-201ENST00000237380 PIGYQ3MUY2 71 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 TRBV7-9A0A0J9YWB2 115 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 IGLV3-19P01714 112 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 CSN3P07498 182 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 PVRIGQ6DKI7 326 aa6.35□□□□□ -1.39
MED28-201ENST00000237380 TAF15Q92804 592 aaKnown RBP eCLIP6.35□□□□□ -1.39
MED28-201ENST00000237380 MDC1Q14676 2089 aaKnown RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 LOC101059948A0A1B0GTJ6 334 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 CYB5R3P00387 301 aaPredicted RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 CKS1BP61024 79 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 DMKNQ6E0U4 476 aaPredicted RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 LCN12Q6JVE5 192 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 TRAV8-6A0A0B4J262 113 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 TRAV39A0A0B4J263 110 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 TRAV21A0A0B4J279 112 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 ZNF205O95201 554 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 TNFRSF6BO95407 300 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 IGHV3-13P01766 116 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 IGHV3-7P01780 117 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 SPSB3Q6PJ21 355 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 IL17DQ8TAD2 202 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 FAM206AQ9NX38 181 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 IGKV3D-11A0A0A0MRZ8 115 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 OVOL1O14753 267 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 IGKV3-11P04433 115 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 RPS27P42677 84 aaKnown RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 LCN2P80188 198 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 CACNA1DQ01668 2161 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 MARCH11A6NNE9 402 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 NAPSAO96009 420 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 TIMP3P35625 211 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 SNRPEP62304 92 aaKnown RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 SLC7A5P1Q8MH63 180 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 SLC25A45Q8N413 288 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 ALX4Q9H161 411 aaPredicted RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 LOC389332A0A1B0GUA5 103 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 C15orf61A6NNL5 157 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 RPS11P62280 158 aaKnown RBP eCLIP6.34□□□□□ -1.39
MED28-201ENST00000237380 TMEM136Q6ZRR5 245 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 MRPS18BQ9Y676 258 aaKnown RBP6.34□□□□□ -1.39
MED28-201ENST00000237380 TRBV7-1A0A0A6YYK4 115 aa6.34□□□□□ -1.39
MED28-201ENST00000237380 J3QLI3 93 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms