RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 LINC01548A6NM66 108 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SRRM4A7MD48 611 aaKnown RBP8.86□□□□□ -0.99
SF3B6-201ENST00000233468 FCN1O00602 326 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 IGHG4P01861 327 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SERPINE2P07093 398 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 CRYGBP07316 175 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SAA1P0DJI8 122 aaPredicted RBP8.86□□□□□ -0.99
SF3B6-201ENST00000233468 RPA2P15927 270 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 CRIP2P52943 208 aaPredicted RBP8.86□□□□□ -0.99
SF3B6-201ENST00000233468 RND3P61587 244 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 ZNF45Q02386 682 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 PRSS8Q16651 343 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 NSUN5P1Q3KNT7 163 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 PHLDA2Q53GA4 152 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 TRIQKQ629K1 86 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 DMBX1Q8NFW5 382 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 PHB2Q99623 299 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SPIN2AQ99865 258 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SPIN2BQ9BPZ2 258 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SLC2A9Q9NRM0 540 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 MCUBQ9NWR8 336 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 SLC2A8Q9NY64 477 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 BET1LQ9NYM9 111 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 FOXA2Q9Y261 457 aaPredicted RBP8.86□□□□□ -0.99
SF3B6-201ENST00000233468 WSB1Q9Y6I7 421 aa8.86□□□□□ -0.99
SF3B6-201ENST00000233468 A6NHS1 94 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 MPPED1O15442 326 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 KBTBD11O94819 623 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 TSPAN15O95858 294 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 CTSDP07339 412 aaPredicted RBP8.85□□□□□ -0.99
SF3B6-201ENST00000233468 FGF2P09038 288 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 PF4V1P10720 104 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 PPP5CP53041 499 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 PIGPP57054 158 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 TNXAQ16473 311 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 FOXB2Q5VYV0 432 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 UNQ5815/PRO19632Q6UWF5 114 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 IDO2Q6ZQW0 420 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 TBC1D26Q86UD7 250 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 CADM3Q8N126 398 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 RNF152Q8N8N0 203 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 MINDY2Q8NBR6 621 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 OR4D10Q8NGI6 311 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 OR4C16Q8NGL9 310 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 GRPEL2Q8TAA5 225 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 TMEM167AQ8TBQ9 72 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 R3HDM4Q96D70 268 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 RBMXL1Q96E39 390 aaKnown RBP8.85□□□□□ -0.99
SF3B6-201ENST00000233468 HRASLSQ9HDD0 168 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 NUBP2Q9Y5Y2 271 aa8.85□□□□□ -0.99
SF3B6-201ENST00000233468 PIGBOS1A0A0B4J2F0 54 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 A0A1W2PN81 502 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 CENPXA8MT69 81 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 NUDT19A8MXV4 375 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 H3BUA1 57 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 RAMP3O60896 148 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 GHRHP01286 108 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 PPIFP30405 207 aaKnown RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 CHRNA7P36544 502 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 LPAR6P43657 344 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 RPL23AP62750 156 aaKnown RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 RPL8P62917 257 aaKnown RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 CFHR3Q02985 330 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 ZNF79Q15937 498 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 POU2AF1Q16633 256 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 ZNF57Q68EA5 555 aaPredicted RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 SSX9Q7RTT3 188 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 SLC25A42Q86VD7 318 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 PUSL1Q8N0Z8 303 aaKnown RBP8.84□□□□□ -0.99
SF3B6-201ENST00000233468 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 OR51S1Q8NGJ8 323 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 GPHA2Q96T91 129 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 TSC22D3Q99576 134 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 TPSG1Q9NRR2 321 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
SF3B6-201ENST00000233468 A0A1W2PRX2 142 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 NAP1L6A6NFF2 107 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 MARCH11A6NNE9 402 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 G3V318 75 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 H0Y980 276 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 SNAPC5O75971 98 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 S1PR2O95136 353 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 IGLV1-40P01703 118 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 PF4P02776 101 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 ZNF735P0CB33 412 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 HLA-GP17693 338 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 PSMB8P28062 276 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 CDX1P47902 265 aaPredicted RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 BRWD1-AS2P59051 145 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 NDPQ00604 133 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 PJVKQ0ZLH3 352 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 KLF9Q13886 244 aaPredicted RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 TCTEX1D4Q5JR98 221 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 THOC7Q6I9Y2 204 aaKnown RBP8.83□□□□□ -1
SF3B6-201ENST00000233468 OR4A47Q6IF82 309 aa8.83□□□□□ -1
SF3B6-201ENST00000233468 ZNF695Q8IW36 515 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms