RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 MPV17L2Q567V2 206 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 FAM27BQ5VT28 67 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 OR4F17Q8NGA8 305 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 OR2Y1Q8NGV0 311 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 ZC2HC1AQ96GY0 325 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 DEPPQ9NTK1 212 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 RNF212BA8MTL3 300 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 TNFSF11O14788 317 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 RAMP3O60896 148 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 CLDN14O95500 239 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 IGLL1P15814 213 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 CLDN15P56746 228 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 ZNF816Q0VGE8 651 aaPredicted RBP13.2□□□□□ -0.3
DDX1-201ENST00000233084 SLC25A53Q5H9E4 307 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 TMEM164Q5U3C3 297 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 AMMECR1LQ6DCA0 310 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 VASH2Q86V25 355 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 FGFBP3Q8TAT2 258 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 CT55Q8WUE5 264 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 MTCH1Q9NZJ7 389 aa13.2□□□□□ -0.3
DDX1-201ENST00000233084 GABRA2P47869 451 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 FXYD3Q14802 87 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 PRR27Q6MZM9 219 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 MRPL54Q6P161 138 aaKnown RBP13.19□□□□□ -0.3
DDX1-201ENST00000233084 OR2M7Q8NG81 312 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 TSKUQ8WUA8 353 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 SFXN3Q9BWM7 321 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 NCOR1P1Q9H4R4 102 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
DDX1-201ENST00000233084 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 AKAP13Q12802 2813 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 C17orf112F2Z3M2 114 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 FGF12P61328 243 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 RPL31P62899 125 aaKnown RBP13.19□□□□□ -0.3
DDX1-201ENST00000233084 PCSK5Q92824 1860 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 EML6Q6ZMW3 1958 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 RAET1LQ5VY80 246 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 OR56B2PQ8NGI1 322 aa13.19□□□□□ -0.3
DDX1-201ENST00000233084 LIN7CQ9NUP9 197 aaKnown RBP13.19□□□□□ -0.3
DDX1-201ENST00000233084 C19orf25Q9UFG5 118 aaPredicted RBP13.19□□□□□ -0.3
DDX1-201ENST00000233084 PMS2P5A8MQ11 134 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 RRHO14718 337 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 SYNGR1O43759 233 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 PCOLCEQ15113 449 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 NEUROG1Q92886 237 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 GNB1LQ9BYB4 327 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 FGF23Q9GZV9 251 aaPredicted RBP13.18□□□□□ -0.3
DDX1-201ENST00000233084 YTHDF2Q9Y5A9 579 aaKnown RBP13.18□□□□□ -0.3
DDX1-201ENST00000233084 G3V3Y1 287 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 TRAPPC2LH3BP13 241 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 FOLR3P41439 243 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 MUC15Q8N387 334 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 DLL3Q9NYJ7 618 aa13.18□□□□□ -0.3
DDX1-201ENST00000233084 C1orf185Q5T7R7 199 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 RNASE7Q9H1E1 156 aaKnown RBP13.17□□□□□ -0.3
DDX1-201ENST00000233084 MEGF9Q9H1U4 602 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 CDC42EP3Q9UKI2 254 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 IGHV1-45A0A0A0MS14 117 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 PIGBOS1A0A0B4J2F0 54 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 COX6A1P12074 109 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 CCL2P13500 99 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 OR10J3Q5JRS4 329 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 DOLPP1Q86YN1 238 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 SLC24A4Q8NFF2 622 aa13.17□□□□□ -0.3
DDX1-201ENST00000233084 USF3Q68DE3 2245 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 TRAV9-2A0A087WT02 112 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 BMPR1BO00238 502 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 TAX1BP3O14907 124 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
DDX1-201ENST00000233084 ASPHD1Q5U4P2 390 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 TMEM136Q6ZRR5 245 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 OR5B3Q8NH48 314 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 IL19Q9UHD0 177 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 SAP30O75446 220 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 NUDT3O95989 172 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 ZNF808Q8N4W9 903 aaPredicted RBP13.16□□□□□ -0.3
DDX1-201ENST00000233084 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 OR2D2Q9H210 308 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 CHTOPQ9Y3Y2 248 aaKnown RBP13.16□□□□□ -0.3
DDX1-201ENST00000233084 V9GYV3 84 aa13.16□□□□□ -0.3
DDX1-201ENST00000233084 SPTBN2O15020 2390 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 GAGE12BA1L429 117 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 CIDEAO60543 219 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 GFRA3O60609 400 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 NTF4P34130 210 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 RHOGP84095 191 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 IGFBP7Q16270 282 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 PRR31Q5SQ13 230 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 MKXQ8IYA7 352 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 PNKDQ8N490 385 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 ZNF439Q8NDP4 499 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 CFAP47Q6ZTR5 3102 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 TRAV9-1A0A075B6T8 112 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A10PA6NDY2 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A18PA6NE21 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A16PA6NEW6 464 aa13.15□□□□□ -0.3
DDX1-201ENST00000233084 FAM90A20PA6NIJ5 464 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms