RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 SRRM4A7MD48 611 aaKnown RBP19.26■□□□□ 0.67
RRP9-201ENST00000232888 ARG1P05089 322 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 PLA2G2AP14555 144 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 DYNLT3P51808 116 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 RNF141Q8WVD5 230 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 TSNAXQ99598 290 aaKnown RBP19.26■□□□□ 0.67
RRP9-201ENST00000232888 MS4A7Q9GZW8 240 aaPredicted RBP19.26■□□□□ 0.67
RRP9-201ENST00000232888 SIRPDQ9H106 197 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 HIPK2Q9H2X6 1198 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 SIRT7Q9NRC8 400 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 MED9Q9NWA0 146 aa19.26■□□□□ 0.67
RRP9-201ENST00000232888 TRAV3A0A0B4J244 114 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 H3BP45 60 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 SEC11BP0C7V7 166 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 RPS16P62249 146 aaKnown RBP19.25■□□□□ 0.67
RRP9-201ENST00000232888 HCP5Q6MZN7 132 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 TMED6Q8WW62 240 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 ATP5SQ99766 215 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 RNF5Q99942 180 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 TCF19Q9Y242 345 aa19.25■□□□□ 0.67
RRP9-201ENST00000232888 OOSP1A8MZH6 123 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 KBTBD11O94819 623 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 SAA1P0DJI8 122 aaPredicted RBP19.24■□□□□ 0.67
RRP9-201ENST00000232888 DLX1P56177 255 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 TPTE2P1Q5T6R2 138 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 VMO1Q7Z5L0 202 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 TMEM217Q8N7C4 229 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 AUP1Q9Y679 476 aa19.24■□□□□ 0.67
RRP9-201ENST00000232888 USF1P22415 310 aaPredicted RBP19.23■□□□□ 0.67
RRP9-201ENST00000232888 TMEM267Q0VDI3 215 aaPredicted RBP19.23■□□□□ 0.67
RRP9-201ENST00000232888 CLINT1Q14677 625 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 VMA21Q3ZAQ7 101 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 MINOS1Q5TGZ0 78 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 OR5B3Q8NH48 314 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 ZDHHC16Q969W1 377 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 MINOS1-NBL1R4GNA1 71 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 FGF16O43320 207 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 METTL15P1P0C7V9 234 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 S100A1P23297 94 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 VDAC2P45880 294 aaPredicted RBP19.23■□□□□ 0.67
RRP9-201ENST00000232888 DVL1P1P54792 670 aaPredicted RBP19.23■□□□□ 0.67
RRP9-201ENST00000232888 ATP6V1FQ16864 119 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 MOB3BQ86TA1 216 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 TMEM167AQ8TBQ9 72 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 OR51B2Q9Y5P1 312 aa19.23■□□□□ 0.67
RRP9-201ENST00000232888 SPP1P10451 314 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 FAM74A1Q5RGS3 127 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 ZNF787Q6DD87 383 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 PINX1Q96BK5 328 aaKnown RBP19.22■□□□□ 0.67
RRP9-201ENST00000232888 PERPQ96FX8 193 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 OR4C12Q96R67 309 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 ENY2Q9NPA8 101 aa19.22■□□□□ 0.67
RRP9-201ENST00000232888 TOX4O94842 621 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 IFNA5P01569 189 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 IGLV2-23P01705 113 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 ATP5IP56385 69 aaPredicted RBP19.21■□□□□ 0.67
RRP9-201ENST00000232888 CCDC144NLQ6NUI1 221 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 TEX45Q8NA69 505 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 GNPNAT1Q96EK6 184 aaPredicted RBP19.21■□□□□ 0.67
RRP9-201ENST00000232888 PARD6GQ9BYG4 376 aaPredicted RBP19.21■□□□□ 0.67
RRP9-201ENST00000232888 HEYLQ9NQ87 328 aaPredicted RBP19.21■□□□□ 0.67
RRP9-201ENST00000232888 MMP26Q9NRE1 261 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 DCHS2Q6V1P9 2916 aa19.21■□□□□ 0.67
RRP9-201ENST00000232888 IGHV4-61A0A0C4DH41 118 aa19.2■□□□□ 0.66
RRP9-201ENST00000232888 SLC25A16P16260 332 aa19.2■□□□□ 0.66
RRP9-201ENST00000232888 HOXB4P17483 251 aaPredicted RBP19.2■□□□□ 0.66
RRP9-201ENST00000232888 CD1BP29016 333 aa19.2■□□□□ 0.66
RRP9-201ENST00000232888 SULT1A2P50226 295 aa19.2■□□□□ 0.66
RRP9-201ENST00000232888 PRB3Q04118 309 aaPredicted RBP19.2■□□□□ 0.66
RRP9-201ENST00000232888 SAT2Q96F10 170 aaPredicted RBP19.2■□□□□ 0.66
RRP9-201ENST00000232888 A0A1W2PPI3 338 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 FAM157CP0CG43 387 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 HOXA1P49639 335 aaPredicted RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 RAB5CP51148 216 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 RPL8P62917 257 aaKnown RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 PRCDQ00LT1 54 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 HAPLN4Q86UW8 402 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 OR10P1Q8NGE3 313 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 TBL2Q9Y4P3 447 aaKnown RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 COL12A1Q99715 3063 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 FAM208BQ5VWN6 2430 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 RNASEK-C17orf49H0YIS7 233 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 FBXO24O75426 580 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 UBE2E1P51965 193 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 SLC38A11Q08AI6 406 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 ARL16Q0P5N6 197 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 KLRD1Q13241 179 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 HABP2Q14520 560 aaPredicted RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 LILRB2Q8N423 598 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 PCNPQ8WW12 178 aaKnown RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 BEX4Q9NWD9 120 aaPredicted RBP19.19■□□□□ 0.66
RRP9-201ENST00000232888 PFDN2Q9UHV9 154 aa19.19■□□□□ 0.66
RRP9-201ENST00000232888 IGHV4-30-2A0A087WSY4 118 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 PMS2P5A8MQ11 134 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 FAM157AC9JC47 383 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 LGALS4P56470 323 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 SPINK9Q5DT21 86 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 OR1L8Q8NGR8 309 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 COMMD5Q9GZQ3 224 aa19.18■□□□□ 0.66
RRP9-201ENST00000232888 LPAR2Q9HBW0 351 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms