RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 APOBEC3DQ96AK3 386 aaPredicted RBP11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 AP1S3Q96PC3 154 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 CLCF1Q9UBD9 225 aa11.89□□□□□ -0.51
PCDHB3-201ENST00000231130 OR5B21A6NL26 309 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 GJE1A6NN92 205 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 SLC25A6P12236 298 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 FOXL1Q12952 345 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 CEACAM21Q3KPI0 293 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 CENPVQ7Z7K6 275 aaPredicted RBP11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 IGHV1-69-2A0A0G2JMI3 117 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 OR7C2O60412 319 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 CTRLP40313 264 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 PRR31Q5SQ13 230 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 OR2D2Q9H210 308 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 LRP5LA4QPB2 252 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 ANKRD30BLA7E2S9 258 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 GRPP07492 148 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 C3AR1Q16581 482 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 TUSC5Q8IXB3 177 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 OR5A2Q8NGI9 324 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 OCC1Q8TAD7 63 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 C12orf49Q9H741 205 aa11.88□□□□□ -0.51
PCDHB3-201ENST00000231130 C10orf142B7Z368 130 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 DKK1O94907 266 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 TMEM144Q7Z5S9 345 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 SMRP1Q8NCR6 262 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 REPIN1Q9BWE0 567 aaKnown RBP11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 CLEC7AQ9BXN2 247 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 LIN7CQ9NUP9 197 aaKnown RBP11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 M0R1X1 148 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 IGHV1-45A0A0A0MS14 117 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 A0A1W2PS18 150 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 S1PR2O95136 353 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 APOA2P02652 100 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 GABRA6Q16445 453 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 GGNQ86UU5 652 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 NAA38Q9BRA0 125 aaKnown RBP11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 C1QTNF5Q9BXJ0 243 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 QTRT1Q9BXR0 403 aaKnown RBP11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 MUC3AQ02505 3323 aa11.87□□□□□ -0.51
PCDHB3-201ENST00000231130 YLPM1P49750 1951 aaKnown RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 MUC21A0A0G2JKD1 596 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 MUC21A0A140T8X8 626 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 IGLV2-14P01704 120 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF83P51522 516 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 PRRX1P54821 245 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 MUC21Q5SSG8 566 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF391Q9UJN7 358 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 MRPS16Q9Y3D3 137 aaKnown RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 COL5A1P20908 1838 aaPredicted RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 ROS1P08922 2347 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 CDIPTO14735 213 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 MMP23AO75900 390 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 RPL30P62888 115 aaKnown RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 FXYD3Q14802 87 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 SF3B5Q9BWJ5 86 aaKnown RBP11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 NPCDR1Q9BY65 106 aa11.86□□□□□ -0.51
PCDHB3-201ENST00000231130 IGLC7A0M8Q6 106 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 ZNF324O75467 553 aaPredicted RBP11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 CA2P00918 260 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 COX6A1P12074 109 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 IGLL1P15814 213 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 MMD2Q8IY49 270 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 SARAFQ96BY9 339 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 DEPPQ9NTK1 212 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 CEP250Q9BV73 2442 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 SCO2A0A1W2PP80 73 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 GAGE10A6NGK3 116 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 SNAI2O43623 268 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 CELA3AP09093 270 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 SSMEM1Q8WWF3 244 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 TMEM147Q9BVK8 224 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 ABCA1O95477 2261 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 CADP27708 2225 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 M0R2Z0 102 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 CORTO00230 105 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 BMI1P35226 326 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 PLP2Q04941 152 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 ACSF3Q4G176 576 aaPredicted RBP11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 LSM10Q969L4 123 aaKnown RBP11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 GPR179Q6PRD1 2367 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 KIAA1549Q9HCM3 1950 aa11.85□□□□□ -0.51
PCDHB3-201ENST00000231130 IGHV2-26A0A0B4J1V2 119 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 C17orf98A8MV24 154 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 OR2H2O95918 312 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 UQCRFS1P47985 274 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 SMIM21Q3B7S5 101 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 KCNE4Q8WWG9 221 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 GMPPAQ96IJ6 420 aaPredicted RBP11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 KCNS1Q96KK3 526 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 CHRDL1Q9BU40 450 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 CDC42EP3Q9UKI2 254 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 TPRP12270 2363 aaKnown RBP11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 TIMP3P35625 211 aa11.84□□□□□ -0.51
PCDHB3-201ENST00000231130 CA7P43166 264 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms