RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
LAMB1-201ENST00000222399 XIRP1Q702N8 1843 aaKnown RBP11.54□□□□□ -0.56
LAMB1-201ENST00000222399 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
LAMB1-201ENST00000222399 CYP2G1PQ6ZSU1 146 aa11.54□□□□□ -0.56
LAMB1-201ENST00000222399 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
LAMB1-201ENST00000222399 GGACTQ9BVM4 153 aa11.54□□□□□ -0.56
LAMB1-201ENST00000222399 A0A0G2JMM0 328 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 A0A1W2PPB8 328 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 A0A1W2PRS3 328 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 KIR3DP1A8MWS1 328 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 NUDT3O95989 172 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 GCHFRP30047 84 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 RAB37Q96AX2 223 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 SSBP3Q9BWW4 388 aaPredicted RBP11.53□□□□□ -0.56
LAMB1-201ENST00000222399 IGHV3OR16-12A0A075B7B8 117 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 PLSCR2Q9NRY7 297 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 SNRPD3P62318 126 aaKnown RBP11.53□□□□□ -0.56
LAMB1-201ENST00000222399 C2orf83Q53S99 150 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 CENPVQ7Z7K6 275 aaPredicted RBP11.53□□□□□ -0.56
LAMB1-201ENST00000222399 OR11H4Q8NGC9 324 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 CASP8AP2Q9UKL3 1982 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 H3BVH4 76 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 NHLRC3Q5JS37 347 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 LOC285556D6RIA3 1793 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 TGIF2-C20orf24A0A0A6YYL0 155 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 UMODP07911 640 aa11.53□□□□□ -0.56
LAMB1-201ENST00000222399 MEF2CQ06413 473 aaPredicted RBP11.53□□□□□ -0.56
LAMB1-201ENST00000222399 RALGAPA2Q2PPJ7 1873 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 LEPROTL1O95214 131 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 IL4P05112 153 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 IGHV1-2P23083 117 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 BSPH1Q075Z2 132 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 C2orf68Q2NKX9 166 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 WDYHV1Q96HA8 205 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.56
LAMB1-201ENST00000222399 DPM3Q9P2X0 92 aa11.52□□□□□ -0.56
LAMB1-201ENST00000222399 IQCF6A8MYZ5 107 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 PARLQ9H300 379 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 AKIRIN1Q9H9L7 192 aaPredicted RBP11.52□□□□□ -0.57
LAMB1-201ENST00000222399 PSME4Q14997 1843 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 PATJQ8NI35 1801 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 ZNF236Q9UL36 1845 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 PEAR1Q5VY43 1037 aaPredicted RBP11.52□□□□□ -0.57
LAMB1-201ENST00000222399 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 LINC00305Q7Z4B0 112 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 IL6RP08887 468 aaPredicted RBP11.52□□□□□ -0.57
LAMB1-201ENST00000222399 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 ABLIM2Q6H8Q1 611 aa11.52□□□□□ -0.57
LAMB1-201ENST00000222399 KBTBD11-OT1A0A1B0GTJ5 212 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 ABHD17AQ96GS6 310 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 RTN4RQ9BZR6 473 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 IFI27L2Q9H2X8 130 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 IGKV3D-15A0A087WSY6 115 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 LOC102723996A0A087X1L8 192 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 IGKV3-15P01624 115 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 SMIM12Q96EX1 92 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 SFRP2Q96HF1 295 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 GPR82Q96P67 336 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 UNC13CQ8NB66 2214 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 BRWD1Q9NSI6 2320 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 CA7P43166 264 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 SPATA45Q537H7 98 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 HIST1H2BAQ96A08 127 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 SIPA1L1O43166 1804 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 A0A0G2JK05 382 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 MOSP00540 346 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 GOLT1AQ6ZVE7 132 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 ANKRD36A6QL64 1941 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 HAX1O00165 279 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 ZNF25P17030 456 aaPredicted RBP11.51□□□□□ -0.57
LAMB1-201ENST00000222399 NPCDR1Q9BY65 106 aa11.51□□□□□ -0.57
LAMB1-201ENST00000222399 SHISA3A0PJX4 238 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 TRGV3P03979 118 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 UCP1P25874 307 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 PSG7Q13046 419 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 ZNF506Q5JVG8 444 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 COL5A1-AS1Q5SY13 56 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 OR13A1Q8NGR1 328 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 ZNF646O15015 1829 aaPredicted RBP11.5□□□□□ -0.57
LAMB1-201ENST00000222399 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 H3BTX0 84 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 LHX2P50458 406 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 DLX6P56179 175 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 OR4A47Q6IF82 309 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 KNTC1P50748 2209 aa11.5□□□□□ -0.57
LAMB1-201ENST00000222399 PQLC2LA1A4F0 135 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 ERVH48-1M5A8F1 160 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 COX6CP09669 75 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 IGFBP3P17936 291 aaPredicted RBP11.49□□□□□ -0.57
LAMB1-201ENST00000222399 SMUG1Q53HV7 270 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 Q5BKY6 102 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 FAM216BQ8N7L0 139 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 CLDND2Q8NHS1 167 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 VENTXO95231 258 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 SRIP30626 198 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 OR10AG1Q8NH19 301 aa11.49□□□□□ -0.57
LAMB1-201ENST00000222399 TMEM70Q9BUB7 260 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms