RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 CRIP3Q6Q6R5 217 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 OR4A5Q8NH83 315 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 MRAP2Q96G30 205 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 DEPPQ9NTK1 212 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 TRAV9-1A0A075B6T8 112 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 FOXI3A8MTJ6 420 aaPredicted RBP11.45□□□□□ -0.58
GABPB1-201ENST00000220429 TMPRSS2O15393 492 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 NXPH3O95157 252 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 NPPCP23582 126 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 ID3Q02535 119 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 RSPO4Q2I0M5 234 aaPredicted RBP11.45□□□□□ -0.58
GABPB1-201ENST00000220429 TMEM177Q53S58 311 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 CCDC144NLQ6NUI1 221 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 GPER1Q99527 375 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 NECAP2Q9NVZ3 263 aa11.45□□□□□ -0.58
GABPB1-201ENST00000220429 HMGB3O15347 200 aaKnown RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 ADAM20O43506 726 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 TSPAN13O95857 204 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 LINC00869P0C866 280 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 NTF3P20783 257 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 TIMP3P35625 211 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 PAX9P55771 341 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF324BQ6AW86 544 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF788Q6ZQV5 615 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 MTURNQ8N3F0 131 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 RPP25LQ8N5L8 163 aaKnown RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 NPFFR1Q9GZQ6 430 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 DNPH1O43598 174 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 CGAP01215 116 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 CD300EQ496F6 205 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 CCDC71LQ8N9Z2 235 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 FER1L6-AS2Q96M78 137 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 TAAR6Q96RI8 345 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 HDHD3Q9BSH5 251 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 SPRY4Q9C004 299 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 MED13Q9UHV7 2174 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 PINLYPA6NC86 204 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF716A6NP11 495 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 H3BP45 60 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 K7EP34 96 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 CA7P43166 264 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 WIPI1Q5MNZ9 446 aaPredicted RBP11.44□□□□□ -0.58
GABPB1-201ENST00000220429 FAM27BQ5VT28 67 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF695Q8IW36 515 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 AP1S3Q96PC3 154 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 STRADBQ9C0K7 418 aa11.44□□□□□ -0.58
GABPB1-201ENST00000220429 FREM1Q5H8C1 2179 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 C3orf85A0A1B0GTC6 90 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 KLRC4-KLRK1H3BQV0 150 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 M0R135 149 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 MPPED1O15442 326 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 CXCL13O43927 109 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 PAGE4O60829 102 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 DHRS3O75911 302 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 C1QL2Q7Z5L3 287 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 TSKUQ8WUA8 353 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF799Q96GE5 643 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 ST20Q9HBF5 79 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 A0A1W2PNU3 283 aaPredicted RBP11.43□□□□□ -0.58
GABPB1-201ENST00000220429 SP9P0CG40 484 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 CYB561P49447 251 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 THBS3P49746 956 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 KISS1Q15726 138 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 SLC25A34Q6PIV7 304 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 C6orf201Q7Z4U5 140 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.43□□□□□ -0.58
GABPB1-201ENST00000220429 SFXN3Q9BWM7 321 aa11.43□□□□□ -0.58
GABPB1-201ENST00000220429 DNAJC13O75165 2243 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 TRBV9A0A0B4J1U6 114 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 NPY1RP25929 384 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 RPL24P83731 157 aaKnown RBP11.42□□□□□ -0.58
GABPB1-201ENST00000220429 CEACAM21Q3KPI0 293 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 Q6ZSR3 168 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 ZNF114Q8NC26 417 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 TMEM222Q9H0R3 208 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 PGPEP1LA6NFU8 196 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 IGKV1D-33P01593 117 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 IGKV1-33P01594 117 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 SERPINE2P07093 398 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 FRMD6-AS1P0C7T7 363 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 HERV-K104P63124 156 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 LTC4SQ16873 150 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 LRRC75BQ2VPJ9 315 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 OR10G8Q8NGN5 311 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 OR10D3Q8NH80 312 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 GNB1LQ9BYB4 327 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 PIGLQ9Y2B2 252 aa11.42□□□□□ -0.58
GABPB1-201ENST00000220429 TSSC4Q9Y5U2 329 aaPredicted RBP11.42□□□□□ -0.58
GABPB1-201ENST00000220429 ARHGAP21Q5T5U3 1957 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 LRP5LA4QPB2 252 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 C11orf94C9JXX5 98 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 EGR1P18146 543 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 CRYGSP22914 178 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 CD1BP29016 333 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 CACNG8Q8WXS5 425 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 COMMD5Q9GZQ3 224 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 SLC25A22Q9H936 323 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 IL36BQ9NZH7 164 aa11.41□□□□□ -0.58
GABPB1-201ENST00000220429 JKAMPQ9P055 326 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms