RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NPFFR1Q9GZQ6 430 aa21.64■■□□□ 1.05
CHMP4B-201ENST00000217402 ATG12O94817 140 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 KBTBD11O94819 623 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 PJVKQ0ZLH3 352 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 IZUMO4Q1ZYL8 232 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 H2BFWTQ7Z2G1 175 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 LYZL2Q7Z4W2 148 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 PPP1R27Q86WC6 154 aa21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 GPN1Q9HCN4 374 aaPredicted RBP21.63■■□□□ 1.05
CHMP4B-201ENST00000217402 A0A0B4J293 547 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 FCN1O00602 326 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 TATDN3Q17R31 274 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 MITD1Q8WV92 249 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 RRNAD1Q96FB5 475 aaKnown RBP21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 PHB2Q99623 299 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 BET1LQ9NYM9 111 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 TRAV3A0A0B4J244 114 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 A0A0G2JRQ6 117 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 CRYBA1P05813 215 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 GNB1P62873 340 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 Q6ZS46 218 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 MINDY2Q8NBR6 621 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 UXS1Q8NBZ7 420 aa21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 RANBP3Q9H6Z4 567 aaPredicted RBP21.62■■□□□ 1.05
CHMP4B-201ENST00000217402 CREBL2O60519 120 aaPredicted RBP21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 CA2P00918 260 aa21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 LRTM2Q8N967 370 aa21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 TMEM167AQ8TBQ9 72 aa21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 HSPB9Q9BQS6 159 aa21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 ZNF430Q9H8G1 570 aaPredicted RBP21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 NSG2Q9Y328 171 aa21.61■■□□□ 1.05
CHMP4B-201ENST00000217402 A0A0B4J2A0 478 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 HOXB5P09067 269 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 OR9G9P0C7N8 305 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 PRSS8Q16651 343 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 MRGPRG-AS1Q2M3A8 158 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 PRIMA1Q86XR5 153 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 SHPKQ9UHJ6 478 aa21.6■■□□□ 1.05
CHMP4B-201ENST00000217402 HLA-DRB1P01911 266 aa21.59■■□□□ 1.05
CHMP4B-201ENST00000217402 C12orf45Q8N5I9 185 aaPredicted RBP21.59■■□□□ 1.05
CHMP4B-201ENST00000217402 MMP24Q9Y5R2 645 aa21.59■■□□□ 1.05
CHMP4B-201ENST00000217402 UPK2O00526 184 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 ADAP1O75689 374 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 P0C879 139 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 OR2B8PP59922 312 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 RPL15P61313 204 aaKnown RBP21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 OR4A5Q8NH83 315 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 PRSS22Q9GZN4 317 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 ALG5Q9Y673 324 aa21.58■■□□□ 1.05
CHMP4B-201ENST00000217402 SNRPGP15A8MWD9 76 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 IL6RP08887 468 aaPredicted RBP21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 VDAC1P21796 283 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 RPL8P62917 257 aaKnown RBP21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 RELBQ01201 579 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 TNXAQ16473 311 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 MMD2Q8IY49 270 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 ZNF702PQ9H963 129 aa21.58■■□□□ 1.04
CHMP4B-201ENST00000217402 IGHV7-81A0A0B4J1V7 117 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 PIGBOS1A0A0B4J2F0 54 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 SNAPC5O75971 98 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 MYOD1P15172 320 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 CX3CL1P78423 397 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 ARSJQ5FYB0 599 aaPredicted RBP21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 LSM10Q969L4 123 aaKnown RBP21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 GPR146Q96CH1 333 aa21.57■■□□□ 1.04
CHMP4B-201ENST00000217402 DUXBA0A1W2PPF3 345 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 RBMXL2O75526 392 aaKnown RBP21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 ACTL6BO94805 426 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 NDPQ00604 133 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 NMSQ5H8A3 153 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 GGNBP1Q5YKI7 109 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 Q6ZSV7 163 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 FAM219AQ8IW50 185 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 OR4A16Q8NH70 328 aa21.56■■□□□ 1.04
CHMP4B-201ENST00000217402 C7orf66A4D0T2 115 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 LINC01548A6NM66 108 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 CNIH1O95406 144 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 HLA-GP17693 338 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 SSBP2P81877 361 aaPredicted RBP21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 TMEM95Q3KNT9 176 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 C10orf55Q5SWW7 151 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 Q6ZRM9 215 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 ABHD5Q8WTS1 349 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 CACNG5Q9UF02 275 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 DBX1A6NMT0 343 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 OPN1MWP04001 364 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 OPN1MW2P0DN77 364 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 OPN1MW3P0DN78 364 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 SLC35E3Q7Z769 313 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 CADM3Q8N126 398 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 GRPEL2Q8TAA5 225 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 OR51J1Q9H342 316 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 PARP11Q9NR21 331 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 TMED3Q9Y3Q3 217 aa21.55■■□□□ 1.04
CHMP4B-201ENST00000217402 CCSO14618 274 aa21.54■■□□□ 1.04
CHMP4B-201ENST00000217402 SSNA1O43805 119 aa21.54■■□□□ 1.04
CHMP4B-201ENST00000217402 FXYD3Q14802 87 aa21.54■■□□□ 1.04
CHMP4B-201ENST00000217402 ZNF562Q6V9R5 426 aa21.54■■□□□ 1.04
CHMP4B-201ENST00000217402 C2CD3Q4AC94 2353 aa21.54■■□□□ 1.04
CHMP4B-201ENST00000217402 C15orf61A6NNL5 157 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms