RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 HIPK2Q9H2X6 1198 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 BET1LQ9NYM9 111 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 UPK2O00526 184 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 TSPAN15O95858 294 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 SNCAP37840 140 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 HSPE1P61604 102 aaKnown RBP15.1■□□□□ 0.01
CTSA-201ENST00000191018 PDPNQ86YL7 162 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 TMEM147Q9BVK8 224 aa15.1■□□□□ 0.01
CTSA-201ENST00000191018 UBE2L5PA0A1B0GUS4 154 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 C22orf46C9J442 243 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 F12P00748 615 aaPredicted RBP15.09■□□□□ 0.01
CTSA-201ENST00000191018 CD5P06127 495 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 SP5Q6BEB4 398 aaPredicted RBP15.09■□□□□ 0.01
CTSA-201ENST00000191018 DPPA3Q6W0C5 159 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 CENPVQ7Z7K6 275 aaPredicted RBP15.09■□□□□ 0.01
CTSA-201ENST00000191018 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
CTSA-201ENST00000191018 NARS2Q96I59 477 aaKnown RBP15.09■□□□□ 0.01
CTSA-201ENST00000191018 NARFLQ9H6Q4 476 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 PRNDQ9UKY0 176 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 ZNF257Q9Y2Q1 563 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 FBXO7Q9Y3I1 522 aa15.09■□□□□ 0.01
CTSA-201ENST00000191018 AGPAT2O15120 278 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 LIPFP07098 398 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 SAA1P0DJI8 122 aaPredicted RBP15.08■□□□□ 0.01
CTSA-201ENST00000191018 IL3RAP26951 378 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 RPP30P78346 268 aaKnown RBP15.08■□□□□ 0.01
CTSA-201ENST00000191018 HLA-DRB5Q30154 266 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 AKR1C8PQ5T2L2 129 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 TGIF2LXQ8IUE1 241 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 CLCC1Q96S66 551 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 SCRT1Q9BWW7 348 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 HEYLQ9NQ87 328 aaPredicted RBP15.08■□□□□ 0.01
CTSA-201ENST00000191018 UQCC1Q9NVA1 299 aa15.08■□□□□ 0.01
CTSA-201ENST00000191018 H7C2Y5 167 aa15.08■□□□□ 0
CTSA-201ENST00000191018 NDUFS7O75251 213 aa15.08■□□□□ 0
CTSA-201ENST00000191018 SCO1O75880 301 aa15.08■□□□□ 0
CTSA-201ENST00000191018 ADCYAP1P18509 176 aa15.08■□□□□ 0
CTSA-201ENST00000191018 MDKP21741 143 aaPredicted RBP15.08■□□□□ 0
CTSA-201ENST00000191018 PRRX1P54821 245 aa15.08■□□□□ 0
CTSA-201ENST00000191018 SERF2P84101 59 aa15.08■□□□□ 0
CTSA-201ENST00000191018 C10orf91Q5T1B1 145 aa15.08■□□□□ 0
CTSA-201ENST00000191018 BEND2Q8NDZ0 799 aa15.08■□□□□ 0
CTSA-201ENST00000191018 OR4C13Q8NGP0 309 aa15.08■□□□□ 0
CTSA-201ENST00000191018 LHX4Q969G2 390 aa15.08■□□□□ 0
CTSA-201ENST00000191018 FLYWCH2Q96CP2 140 aaKnown RBP15.08■□□□□ 0
CTSA-201ENST00000191018 HARBI1Q96MB7 349 aa15.08■□□□□ 0
CTSA-201ENST00000191018 CLEC7AQ9BXN2 247 aa15.08■□□□□ 0
CTSA-201ENST00000191018 TMEM231Q9H6L2 316 aa15.08■□□□□ 0
CTSA-201ENST00000191018 FAM96BQ9Y3D0 163 aa15.08■□□□□ 0
CTSA-201ENST00000191018 TIMM9Q9Y5J7 89 aa15.08■□□□□ 0
CTSA-201ENST00000191018 RNASEK-C17orf49H0YIS7 233 aa15.07■□□□□ 0
CTSA-201ENST00000191018 KBTBD11O94819 623 aa15.07■□□□□ 0
CTSA-201ENST00000191018 DVL1P1P54792 670 aaPredicted RBP15.07■□□□□ 0
CTSA-201ENST00000191018 DLX1P56177 255 aa15.07■□□□□ 0
CTSA-201ENST00000191018 RPS16P62249 146 aaKnown RBP15.07■□□□□ 0
CTSA-201ENST00000191018 SPSB3Q6PJ21 355 aa15.07■□□□□ 0
CTSA-201ENST00000191018 TMEM170AQ8WVE7 144 aa15.07■□□□□ 0
CTSA-201ENST00000191018 TREM1Q9NP99 234 aa15.07■□□□□ 0
CTSA-201ENST00000191018 WASHC3Q9Y3C0 194 aa15.07■□□□□ 0
CTSA-201ENST00000191018 OR51B2Q9Y5P1 312 aa15.07■□□□□ 0
CTSA-201ENST00000191018 hCG_1809904A0A1W2PP81 198 aa15.06■□□□□ 0
CTSA-201ENST00000191018 A0A1W2PPE2 198 aa15.06■□□□□ 0
CTSA-201ENST00000191018 A0A1W2PR64 198 aa15.06■□□□□ 0
CTSA-201ENST00000191018 A0A1W2PRV1 198 aa15.06■□□□□ 0
CTSA-201ENST00000191018 FAM157AC9JC47 383 aa15.06■□□□□ 0
CTSA-201ENST00000191018 PRSS46E5RG02 174 aa15.06■□□□□ 0
CTSA-201ENST00000191018 GOSR1O95249 250 aa15.06■□□□□ 0
CTSA-201ENST00000191018 IFNA10P01566 189 aa15.06■□□□□ 0
CTSA-201ENST00000191018 APOC3P02656 99 aa15.06■□□□□ 0
CTSA-201ENST00000191018 HOXA1P49639 335 aaPredicted RBP15.06■□□□□ 0
CTSA-201ENST00000191018 EFNA4P52798 201 aa15.06■□□□□ 0
CTSA-201ENST00000191018 LFNGQ8NES3 379 aa15.06■□□□□ 0
CTSA-201ENST00000191018 SSBP3Q9BWW4 388 aaPredicted RBP15.06■□□□□ 0
CTSA-201ENST00000191018 RRHO14718 337 aa15.06■□□□□ 0
CTSA-201ENST00000191018 MYOD1P15172 320 aa15.06■□□□□ 0
CTSA-201ENST00000191018 MC5RP33032 325 aa15.06■□□□□ 0
CTSA-201ENST00000191018 GPR6P46095 362 aaPredicted RBP15.06■□□□□ 0
CTSA-201ENST00000191018 RAB13P51153 203 aa15.06■□□□□ 0
CTSA-201ENST00000191018 Q8N7P7 452 aa15.06■□□□□ 0
CTSA-201ENST00000191018 CACNA1BQ00975 2339 aa15.05■□□□□ 0
CTSA-201ENST00000191018 BUB1B-PAK6H3BSN5 160 aa15.05■□□□□ -0
CTSA-201ENST00000191018 OVOL3O00110 214 aa15.05■□□□□ -0
CTSA-201ENST00000191018 H2AFB1P0C5Y9 115 aa15.05■□□□□ -0
CTSA-201ENST00000191018 PRCDQ00LT1 54 aa15.05■□□□□ -0
CTSA-201ENST00000191018 RPRMQ9NS64 109 aa15.05■□□□□ -0
CTSA-201ENST00000191018 FKBP11Q9NYL4 201 aa15.05■□□□□ -0
CTSA-201ENST00000191018 TNCP24821 2201 aa15.04■□□□□ -0
CTSA-201ENST00000191018 BTBD17A6NE02 478 aa15.04■□□□□ -0
CTSA-201ENST00000191018 IGLV2-23P01705 113 aa15.04■□□□□ -0
CTSA-201ENST00000191018 TLE4Q04727 773 aa15.04■□□□□ -0
CTSA-201ENST00000191018 ETV3LQ6ZN32 361 aa15.04■□□□□ -0
CTSA-201ENST00000191018 OR4P4Q8NGL7 312 aa15.04■□□□□ -0
CTSA-201ENST00000191018 OR5B3Q8NH48 314 aa15.04■□□□□ -0
CTSA-201ENST00000191018 BBC3Q96PG8 261 aaPredicted RBP15.04■□□□□ -0
CTSA-201ENST00000191018 GGACTQ9BVM4 153 aa15.04■□□□□ -0
CTSA-201ENST00000191018 ONECUT1Q9UBC0 465 aa15.04■□□□□ -0
CTSA-201ENST00000191018 CARHSP1Q9Y2V2 147 aaKnown RBP15.04■□□□□ -0
CTSA-201ENST00000191018 LOC105371242A0A075B767 164 aa15.03■□□□□ -0
CTSA-201ENST00000191018 TEX50A0A1B0GTY4 177 aa15.03■□□□□ -0
CTSA-201ENST00000191018 A0A1B0GW64 132 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms