RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 STRAPQ9Y3F4 350 aaKnown RBP12.65□□□□□ -0.38
LAPTM4A-201ENST00000175091 AMMECR1Q9Y4X0 333 aaPredicted RBP12.65□□□□□ -0.38
LAPTM4A-201ENST00000175091 FAM208BQ5VWN6 2430 aa12.65□□□□□ -0.38
LAPTM4A-201ENST00000175091 VPS13CQ709C8 3753 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ZFP36P26651 326 aaKnown RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ATP6V0CP27449 155 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 VDAC2P45880 294 aaPredicted RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ARF6P62330 175 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 HSD17B13Q7Z5P4 300 aaPredicted RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 MARVELD3Q96A59 401 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 FLYWCH2Q96CP2 140 aaKnown RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 TSNAXQ99598 290 aaKnown RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 PRNDQ9UKY0 176 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 CHD6Q8TD26 2715 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 UPK2O00526 184 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ENSAO43768 121 aaKnown RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 MC5RP33032 325 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 PDLIM4P50479 330 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 PAX2Q02962 417 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 SLC38A11Q08AI6 406 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 PNKDQ8N490 385 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 EIF4E3Q8N5X7 224 aaKnown RBP12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR11H6Q8NGC7 330 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 CLDND2Q8NHS1 167 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 LHX4Q969G2 390 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 ZNF257Q9Y2Q1 563 aa12.64□□□□□ -0.39
LAPTM4A-201ENST00000175091 TNCP24821 2201 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 KBTBD11O94819 623 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 FGF2P09038 288 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 PRTN3P24158 256 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 LMO4P61968 165 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 TOR2AQ5JU69 321 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 C1orf122Q6ZSJ8 110 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 LILRB2Q8N423 598 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 UNKLQ9H9P5 680 aaKnown RBP12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 ABCA2Q9BZC7 2435 aa12.63□□□□□ -0.39
LAPTM4A-201ENST00000175091 IGHV1-3A0A0C4DH29 117 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 ODF3BA8MYP8 253 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 LY6LH3BQJ8 138 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 SCAF4O95104 1147 aaKnown RBP12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 RUNX1Q01196 453 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 HCP5Q6MZN7 132 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 PARD6GQ9BYG4 376 aaPredicted RBP12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 PARP11Q9NR21 331 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 KPTNQ9Y664 436 aa12.62□□□□□ -0.39
LAPTM4A-201ENST00000175091 IFNA5P01569 189 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 IGLV2-23P01705 113 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 HOXA1P49639 335 aaPredicted RBP12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 Q6ZRG5 221 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 VSTM2AQ8TAG5 236 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 CLCC1Q96S66 551 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR51B2Q9Y5P1 312 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 IGHV2-70DA0A0C4DH43 119 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 I3L521 148 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 COX6B1P14854 86 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 MYOD1P15172 320 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 RAB5CP51148 216 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 PRCDQ00LT1 54 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 KLRD1Q13241 179 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 LDLRAD2Q5SZI1 272 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 TMEM182Q6ZP80 229 aaPredicted RBP12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 RPEQ96AT9 228 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 PINX1Q96BK5 328 aaKnown RBP12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 HIPK2Q9H2X6 1198 aa12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 HEYLQ9NQ87 328 aaPredicted RBP12.61□□□□□ -0.39
LAPTM4A-201ENST00000175091 FBN2P35556 2912 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 A0A1W2PPI3 338 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 NDUFS8O00217 210 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 USF1P22415 310 aaPredicted RBP12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 RPS16P62249 146 aaKnown RBP12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 BLOC1S1P78537 153 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 LCN2P80188 198 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 VMO1Q7Z5L0 202 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR2G3Q8NGZ4 309 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR5B3Q8NH48 314 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR4A5Q8NH83 315 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 PIMREGQ9BSJ6 248 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 SIRPDQ9H106 197 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 INSIG2Q9Y5U4 225 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
LAPTM4A-201ENST00000175091 IGHV3-72A0A0B4J1Y9 119 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 UBE2L5PA0A1B0GUS4 154 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 A1L4Q6 167 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 UMAD1C9J7I0 102 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 OR8U8P0C7N1 319 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 F2RL1P55085 397 aa12.59□□□□□ -0.39
LAPTM4A-201ENST00000175091 RPP30P78346 268 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms