RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 C1orf196B1AJZ1 125 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 SHISA9B4DS77 424 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 ATXN7O15265 892 aaPredicted RBP6.79□□□□□ -1.32
VAMP3-201ENST00000054666 CYB5BO43169 146 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 IFNA4P05014 189 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 RAB13P51153 203 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 PNRC1Q12796 327 aaPredicted RBP6.79□□□□□ -1.32
VAMP3-201ENST00000054666 IQCF2Q8IXL9 164 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 RPP25LQ8N5L8 163 aaKnown RBP6.79□□□□□ -1.32
VAMP3-201ENST00000054666 ZNF383Q8NA42 475 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 HIST1H2BAQ96A08 127 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 ISOC2Q96AB3 205 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 MANBALQ9NQG1 85 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 PRNDQ9UKY0 176 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 WDR83OSQ9Y284 106 aa6.79□□□□□ -1.32
VAMP3-201ENST00000054666 TRAV3A0A0B4J244 114 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 B9A039 149 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 E7EQL1 145 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 OR2C1O95371 312 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 IGKV1D-33P01593 117 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 IGKV1-33P01594 117 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 FBP1P09467 338 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 APOBEC3AP31941 199 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 CA7P43166 264 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 VDAC2P45880 294 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 CDC34P49427 236 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 PSMB3P49720 205 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 DLK1P80370 383 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 NHLH1Q02575 133 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 KLRB1Q12918 225 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 POU2AF1Q16633 256 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 UTF1Q5T230 341 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 HEPN1Q6WQI6 88 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 PIP4P2Q8N4L2 257 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 SLC24A4Q8NFF2 622 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 OR13D1Q8NGV5 346 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 SAV1Q9H4B6 383 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 BIN3Q9NQY0 253 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 RAXQ9Y2V3 346 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 YLPM1P49750 1951 aaKnown RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 A0A087WWC5 75 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 MMP23AO75900 390 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 NPY1RP25929 384 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 CHRNB4P30926 498 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 HSPE1P61604 102 aaKnown RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 PMS2P11Q13670 270 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 EFNB3Q15768 340 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 RNF212Q495C1 297 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 DMRTC2Q8IXT2 367 aaPredicted RBP6.78□□□□□ -1.32
VAMP3-201ENST00000054666 OR10X1Q8NGY0 326 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 HINT2Q9BX68 163 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 PLEKHA3Q9HB20 300 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 TMEM14BQ9NUH8 114 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 OR51B2Q9Y5P1 312 aa6.78□□□□□ -1.32
VAMP3-201ENST00000054666 IGHV1-69-2A0A0G2JMI3 117 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 B4DEV8 164 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 HMGB3O15347 200 aaKnown RBP6.77□□□□□ -1.33
VAMP3-201ENST00000054666 NDUFA2O43678 99 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 CT45A6P0DMU7 189 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 CT45A5P0DMU8 189 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 CT45A7P0DMV0 189 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 CCL3L1P16619 93 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 MEF2BQ02080 365 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-201ENST00000054666 FAM90A2PQ658T7 463 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF833PQ6ZTB9 187 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 CA5BP1Q8WTZ4 195 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ZCCHC14Q8WYQ9 949 aaKnown RBP6.77□□□□□ -1.33
VAMP3-201ENST00000054666 RAB24Q969Q5 203 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 FKBP11Q9NYL4 201 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 A0A1W2PPV4 95 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 RRHO14718 337 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 RAB5AP20339 215 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 MDKP21741 143 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-201ENST00000054666 RAB31Q13636 194 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 TMEM200BQ69YZ2 307 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 FAM71F2Q6NXP2 309 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ZFP82Q8N141 532 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ST6GALNAC3Q8NDV1 305 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 OSR1Q8TAX0 266 aaPredicted RBP6.77□□□□□ -1.33
VAMP3-201ENST00000054666 C2CD4CQ8TF44 421 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 NEUROG1Q92886 237 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 HARBI1Q96MB7 349 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 SIRT7Q9NRC8 400 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 PRELID1Q9Y255 219 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF257Q9Y2Q1 563 aa6.77□□□□□ -1.33
VAMP3-201ENST00000054666 hCG_1809904A0A1W2PP81 198 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 A0A1W2PR64 198 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 A0A1W2PRV1 198 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 ZNF727A8MUV8 499 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 J3QR06 171 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 CCL21O00585 134 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 DVL1O14640 695 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 EIF3GO75821 320 aaKnown RBP eCLIP6.76□□□□□ -1.33
VAMP3-201ENST00000054666 S100A6P06703 90 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 OPRK1P41145 380 aa6.76□□□□□ -1.33
VAMP3-201ENST00000054666 FBXL19-AS1Q494R0 122 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms