RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 YTHDF1Q9BYJ9 559 aaKnown RBP12□□□□□ -0.49
ERCC1-201ENST00000013807 A0A1B0GW64 132 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 E7EUB6 86 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 GGCTO75223 188 aaKnown RBP11.99□□□□□ -0.49
ERCC1-201ENST00000013807 IFNA6P05013 189 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
ERCC1-201ENST00000013807 SFXN4Q6P4A7 337 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 FANCD2OSQ96PS1 177 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 TUBA4BQ9H853 241 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 TECRQ9NZ01 308 aaKnown RBP11.99□□□□□ -0.49
ERCC1-201ENST00000013807 DAPK2Q9UIK4 370 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 RYR2Q92736 4967 aa11.99□□□□□ -0.49
ERCC1-201ENST00000013807 STARD9Q9P2P6 4700 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 DNAH1Q9P2D7 4330 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 A0A0A6YYH2 397 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 A6NJ64 397 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 J3QRK9 145 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 RBFOX2O43251 390 aaKnown RBP eCLIP11.98□□□□□ -0.49
ERCC1-201ENST00000013807 OR2J3O76001 311 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 HRASP01112 189 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 FGF2P09038 288 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
ERCC1-201ENST00000013807 GNG2P59768 71 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 ZBTB34Q8NCN2 500 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 FYTTD1Q96QD9 318 aaKnown RBP11.98□□□□□ -0.49
ERCC1-201ENST00000013807 AIFM2Q9BRQ8 373 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 HIPK2Q9H2X6 1198 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 RHBDL2Q9NX52 303 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 SSR3Q9UNL2 185 aa11.98□□□□□ -0.49
ERCC1-201ENST00000013807 SMIM30A4D0T7 59 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 HMX3A6NHT5 357 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 C2orf70A6NJV1 201 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 TMEM127O75204 238 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 CTRB1P17538 263 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 PSMB6P28072 239 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 POU2AF1Q16633 256 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 CTRB2Q6GPI1 263 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 OR4A5Q8NH83 315 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 LGALS14Q8TCE9 139 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 NEURL2Q9BR09 285 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 SLC2A8Q9NY64 477 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 FBXL7Q9UJT9 491 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 SPATA2Q9UM82 520 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 RRP15Q9Y3B9 282 aaKnown RBP11.97□□□□□ -0.49
ERCC1-201ENST00000013807 ETV7Q9Y603 341 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 CEPT1Q9Y6K0 416 aa11.97□□□□□ -0.49
ERCC1-201ENST00000013807 A8MWP6 167 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 DHFRP00374 187 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 FOLR2P14207 255 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 HIST1H1BP16401 226 aaKnown RBP11.96□□□□□ -0.49
ERCC1-201ENST00000013807 PSMB9P28065 219 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 SDC2P34741 201 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 CD81P60033 236 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 RPL8P62917 257 aaKnown RBP11.96□□□□□ -0.49
ERCC1-201ENST00000013807 OR2B11Q5JQS5 317 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 HOGA1Q86XE5 327 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 BEST4Q8NFU0 473 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 TCTEX1D2Q8WW35 142 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 CCDC140Q96MF4 163 aa11.96□□□□□ -0.49
ERCC1-201ENST00000013807 IGLV11-55A0A075B6I3 123 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 PPP5D1E7EU14 171 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 TPPPO94811 219 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 NDUFB8O95169 186 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 OR2C1O95371 312 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 CD7P09564 240 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 CBLN1P23435 193 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 SLC25A38Q96DW6 304 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 SRSF8Q9BRL6 282 aaKnown RBP11.95□□□□□ -0.5
ERCC1-201ENST00000013807 TAS2R8Q9NYW2 309 aa11.95□□□□□ -0.5
ERCC1-201ENST00000013807 TRBV7-1A0A0A6YYK4 115 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 RBMY1BA6NDE4 496 aaKnown RBP11.94□□□□□ -0.5
ERCC1-201ENST00000013807 RBMY1EA6NEQ0 496 aaKnown RBP11.94□□□□□ -0.5
ERCC1-201ENST00000013807 PPYP01298 95 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 RBMY1DP0C7P1 496 aaKnown RBP11.94□□□□□ -0.5
ERCC1-201ENST00000013807 AREGP15514 252 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 FCGR2CP31995 323 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 TAS2R31P59538 309 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 OR4A47Q6IF82 309 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 ZNF773Q6PK81 442 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 OR5H6Q8NGV6 325 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 GIMAP1Q8WWP7 306 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 PLEKHA3Q9HB20 300 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 CCL28Q9NRJ3 127 aa11.94□□□□□ -0.5
ERCC1-201ENST00000013807 TMEM213A2RRL7 107 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 DPPA5A6NC42 116 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 OR11H12B2RN74 326 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 HPRT1P00492 218 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 HLA-AP01891 365 aaKnown RBP11.93□□□□□ -0.5
ERCC1-201ENST00000013807 C8orf88P0DMB2 117 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 HLA-GP17693 338 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 ARL3P36405 182 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 OR2B8PP59922 312 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 ARPC4P59998 168 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 TIMM50Q3ZCQ8 353 aa11.93□□□□□ -0.5
ERCC1-201ENST00000013807 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms