RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OR5I1Q13606 314 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
USH1C-201ENST00000005226 C1orf229Q6ZS94 237 aaPredicted RBP11.63□□□□□ -0.55
USH1C-201ENST00000005226 Q6ZWC4 215 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 OR4A16Q8NH70 328 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 FAM122AQ96E09 287 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 C1orf159Q96HA4 380 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 DIRC2Q96SL1 478 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 SPENQ96T58 3664 aaKnown RBP11.63□□□□□ -0.55
USH1C-201ENST00000005226 TRGV5A0A0B4J1U4 118 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 DUTP33316 252 aaKnown RBP11.63□□□□□ -0.55
USH1C-201ENST00000005226 ZNF134P52741 427 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 ZNF90Q03938 601 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 FOXL1Q12952 345 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 TRIP6Q15654 476 aaKnown RBP11.63□□□□□ -0.55
USH1C-201ENST00000005226 C1orf194Q5T5A4 169 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 TOMM20LQ6UXN7 152 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 CNEP1R1Q8N9A8 125 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 OR10G8Q8NGN5 311 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 CMTM2Q8TAZ6 248 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 GGTLC1Q9BX51 225 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 GNG12Q9UBI6 72 aa11.63□□□□□ -0.55
USH1C-201ENST00000005226 IGHV3OR15-7A0A075B7D8 119 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 TIMM8AO60220 97 aaPredicted RBP11.62□□□□□ -0.55
USH1C-201ENST00000005226 ACP1P24666 158 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 TIMP3P35625 211 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 CDKN1AP38936 164 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 HEATR1Q9H583 2144 aaKnown RBP11.62□□□□□ -0.55
USH1C-201ENST00000005226 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 ACTL6BO94805 426 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 ASPHD1Q5U4P2 390 aa11.62□□□□□ -0.55
USH1C-201ENST00000005226 HSD17B10Q99714 261 aaKnown RBP11.62□□□□□ -0.55
USH1C-201ENST00000005226 C15orf65H3BRN8 121 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 SERF1AO75920 110 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 STAG3L2P0CL84 134 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 STAG3L3P0CL85 134 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 RPL31P62899 125 aaKnown RBP11.61□□□□□ -0.55
USH1C-201ENST00000005226 SLC35B1P78383 322 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 KRTCAP3Q53RY4 240 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 HINT2Q9BX68 163 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 BOD1L1Q8NFC6 3051 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 M0R143 59 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 HPRT1P00492 218 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
USH1C-201ENST00000005226 IER3P46695 156 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 GABRA6Q16445 453 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 MDS2Q8NDY4 140 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 LRRC29Q8WV35 223 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 HSPB9Q9BQS6 159 aa11.61□□□□□ -0.55
USH1C-201ENST00000005226 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
USH1C-201ENST00000005226 KLF13Q9Y2Y9 288 aaPredicted RBP11.61□□□□□ -0.55
USH1C-201ENST00000005226 GFRA3O60609 400 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 CD99P14209 185 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 OR10J1P30954 320 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 OPRK1P41145 380 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 VDAC2P45880 294 aaPredicted RBP11.6□□□□□ -0.55
USH1C-201ENST00000005226 ZCCHC14Q8WYQ9 949 aaKnown RBP11.6□□□□□ -0.55
USH1C-201ENST00000005226 RYDENQ9NUL5 291 aaKnown RBP11.6□□□□□ -0.55
USH1C-201ENST00000005226 PAM16Q9Y3D7 125 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 RNF114Q9Y508 228 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 PTPRBP23467 1997 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 TMEM210A6NLX4 147 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 AHRRA9YTQ3 701 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 SPINT2O43291 252 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 IL6RP08887 468 aaPredicted RBP11.6□□□□□ -0.55
USH1C-201ENST00000005226 TDGF1P3P51864 188 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 TRIB1Q96RU8 372 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 FAM103A1Q9BTL3 118 aaKnown RBP11.6□□□□□ -0.55
USH1C-201ENST00000005226 CXXC4Q9H2H0 198 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 PARD6AQ9NPB6 346 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 TMEM106BQ9NUM4 274 aa11.6□□□□□ -0.55
USH1C-201ENST00000005226 CXorf1O96002 111 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 CGAP01215 116 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 GCHFRP30047 84 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 PRDX2P32119 198 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 RELBQ01201 579 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 BATFQ16520 125 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 ZNF718Q3SXZ3 478 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 ARSJQ5FYB0 599 aaPredicted RBP11.59□□□□□ -0.55
USH1C-201ENST00000005226 PEAR1Q5VY43 1037 aaPredicted RBP11.59□□□□□ -0.55
USH1C-201ENST00000005226 MOB3BQ86TA1 216 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 ZNRF1Q8ND25 227 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 OR4P4Q8NGL7 312 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 VN1R17PQ8TDU5 208 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 TNCP24821 2201 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 PRSS46E5RG02 174 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 CRISP2P16562 243 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 MORN2Q502X0 79 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 RAB1CQ92928 201 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 DUSP13Q9UII6 198 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 KIR2DL5BA0A0G2JN68 375 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.59□□□□□ -0.55
USH1C-201ENST00000005226 KIR2DL5BA0A0G2JPC4 375 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 FCN1O00602 326 aa11.59□□□□□ -0.55
USH1C-201ENST00000005226 GATA2P23769 480 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms