RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 F12Q80YC5 597 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Actbl2Q8BFZ3 376 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Tssk5Q8C1R0 372 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Nudt16l1Q8VHN8 211 aaKnown RBP13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Mrpl3Q99N95 348 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Rab27bQ99P58 218 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gng13Q9JMF3 67 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ctxnd2A0A1B0GQX3 59 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gm8265K7N6Y8 158 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 PkiaP63248 76 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 B3gnt8Q8R3I9 389 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ccr9Q9WUT7 369 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1410E9PYK6 323 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Prdx6O08709 224 aaKnown RBP13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 TcapO70548 167 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 PomcP01193 235 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Cib3Q0P523 160 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ldlrad4Q8BWJ4 306 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1412Q8VET3 321 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1462Q8VFW3 307 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 FetubQ9QXC1 388 aa13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Dido1Q8C9B9 2256 aaKnown RBP13.24□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr102B2RT33 308 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1348F6VB59 318 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 McptlQ00356 246 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Vmn1r15Q14C10 299 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Q504N7 393 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Smap2Q7TN29 428 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Slc25a28Q8R0Z5 364 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr122W4VSP0 330 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Sirpb1bA0A0A6YXN8 397 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Tmem182B2RVY9 229 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Sirpb1cK7N6K7 397 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 GzmdP11033 252 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Rac2Q05144 192 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1269Q8VEZ2 309 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1265Q8VEZ3 309 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Prss41Q920S2 322 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Sun5Q9DA32 373 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gm17087V9GXQ2 156 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr1274-psA0A1L1SQ02 309 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gm14443A2ARX0 610 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr914E9PW59 316 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gp49aQ61450 303 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gm16503Q8C6M9 103 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Slc24a4Q8CGQ8 622 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr99Q8VFE4 305 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Tmem88Q9D0N8 159 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 PipoxQ9D826 390 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 1700025F22RikQ9D9Y7 111 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Rnf7Q9WTZ1 113 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 BC024063A0A1W2P7G7 749 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 2010315B03RikJ3QK55 433 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 HhexP43120 271 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ceacam12Q3UKP4 300 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr517Q7TRU4 314 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Plekha3Q9ERS4 297 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Klrc3Q9QXN7 221 aa13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 Eif3gQ9Z1D1 320 aaKnown RBP13.23□□□□□ -0.29
Upf1-202ENSMUST00000215817 DffbO54788 344 aaKnown RBP13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Il4P07750 140 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Fgf2P15655 154 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 AplfQ9D842 499 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Suv39h2Q9EQQ0 477 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Plekhb1Q9QYE9 243 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 SrpxQ9R0M3 464 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Lrrc29A0A1B0GQY9 621 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Zcchc24B2RVL6 241 aaKnown RBP13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 BatfO35284 125 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Mr1Q8HWB0 341 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Tmem41bQ8K1A5 291 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr490Q8VFD2 314 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Scgb1b27Q91WB5 92 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Pip4p2Q9CZX7 257 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Tmem219Q9D123 240 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Prok2Q9QXU7 128 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr573-ps1A0A1B0GRU2 297 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gm17655A0A1B0GT13 591 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Vmn1r124D3YTX4 307 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gpr12P35412 334 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ca10P61215 328 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Crybb2P62696 205 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 S100a3P62818 101 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Rnf224Q3UIW8 156 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Arg1Q61176 323 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Zfp459Q8BZ17 267 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Olfr181Q8VGQ7 317 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ccl8Q9Z121 97 aa13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 MyofQ69ZN7 2048 aaKnown RBP13.22□□□□□ -0.29
Upf1-202ENSMUST00000215817 Spsb2O88838 264 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Cln5Q3UMW8 341 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Vmn1r4Q8R2D3 297 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Cisd1Q91WS0 108 aaKnown RBP13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Phf3B2RQG2 2025 aaKnown RBP13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Pdcd6P12815 191 aaKnown RBP13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Pax6P63015 422 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Gpr137Q80ZU9 396 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Ubac2Q8R1K1 345 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 LgalslQ8VED9 172 aa13.21□□□□□ -0.29
Upf1-202ENSMUST00000215817 Prss30Q9QYZ9 310 aa13.21□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 32.7 ms