RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Klk1b3P00756 261 aa20.47■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Ppp1caP62137 330 aaKnown RBP20.47■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Rab33bO35963 229 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Abhd14aQ922Q6 247 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 NubplQ9CWD8 319 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Plin4O88492 1403 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Ogg1O08760 345 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 C030005K15RikQ8BQN9 115 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Eva1aQ91WM6 156 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Zfc3h1B2RT41 1992 aaKnown RBP20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Gm20877J3QPZ4 227 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Sh2d1bO35324 132 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Cnn1Q08091 297 aaKnown RBP20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Olfr1408Q8VG32 310 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Irak1bp1Q9ESJ7 259 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Ca3P16015 260 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Ube2l3P68037 154 aaKnown RBP20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 PirtQ8BFY0 135 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Olfr1368Q8VFG3 314 aa20.46■□□□□ 0.87
Sh3rf1-201ENSMUST00000034060 Olfr143P34985 313 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Srsf4Q8VE97 489 aaKnown RBP20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cds2Q99L43 444 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Klf9O35739 244 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Defa6P50704 93 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Foxb2Q64733 428 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Wdr13Q91V09 485 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 DapQ91XC8 102 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 A0A286YCH8 300 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 3110040M04RikA0A286YDK0 300 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 A0A286YE43 300 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm7714E9Q079 131 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 BtlaQ7TSA3 306 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Nit1Q8VDK1 323 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Mbnl1Q9JKP5 341 aaKnown RBP20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Golga4Q91VW5 2238 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Trbv5A0A0B4J1G9 113 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r224E9PWK2 298 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 A630073D07RikE9PWS6 100 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 G530012D18RikJ3QK25 139 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Wfdc6aQ3UW55 136 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Fam57aQ5ND56 257 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 CtsoQ8BM88 312 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ear10Q923L6 156 aa20.45■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 CymB7ZWD6 379 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm9242J3QNY1 357 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Rag2P21784 527 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Serf2P84102 59 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Sh3bgrl2Q8BG73 107 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Mob3aQ8BSU7 217 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Prss47A0A0N4SVQ0 395 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cd46O88174 365 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Prrx1P63013 245 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Msl2Q69ZF8 577 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 C1sbQ8CFG8 688 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr789A0A1L1SV77 312 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Emp2O88662 172 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 FaslgP41047 279 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Dhrs11Q3U0B3 260 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1404Q8VGE1 313 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Glipr1Q9CWG1 255 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tex101Q9JMI7 250 aa20.44■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 F2rl2O08675 369 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ly6dP35459 127 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Zfp933Q6PEE4 468 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Flrt3Q8BGT1 649 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tmem251Q8BH26 163 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Tceal5Q8CCT4 200 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 AamdcQ8R0P4 122 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Fdx2Q9CPW2 174 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 ClpsQ9CQC2 113 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 1700025C18RikA2A580 89 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 R3hdmlA2A5I3 253 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cd74P04441 279 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 MgpP19788 104 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Dlx4P70436 240 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gpank1Q61858 372 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Ecm29Q6PDI5 1840 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1245A0A1L1SQJ6 307 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 UcnP81615 122 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Fam234aQ8C0Z1 555 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1179A2AUS6 307 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm5108J3QP01 101 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Fgfbp1O70514 251 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vax1Q2NKI2 338 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 S1pr5Q91X56 400 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Q9DAL9 119 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Cldn15Q9Z0S5 227 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vma21-psA0A140T8R2 101 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Zfp941Q3URY5 674 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Dusp28Q8BTR5 163 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1271Q8VG62 305 aa20.43■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Igkv6-29A0A0G2JEI6 115 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Masp1P98064 704 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Znf48Q3US17 591 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Hes7Q8BKT2 225 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr829Q8VGX1 321 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Olfr1191-ps1A0A1L1STD5 311 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Gm5093E9PZB3 174 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Vmn1r128L7N2B4 307 aa20.42■□□□□ 0.86
Sh3rf1-201ENSMUST00000034060 Spam1P48794 512 aa20.42■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms