RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Exosc6Q8BTW3 273 aa9.47□□□□□ -0.89
Msh3-201ENSMUST00000022220 Rhno1Q8K3A4 235 aa9.47□□□□□ -0.89
Msh3-201ENSMUST00000022220 Olfr638Q8VH20 321 aa9.47□□□□□ -0.89
Msh3-201ENSMUST00000022220 Mrpl42Q9CPV3 142 aa9.47□□□□□ -0.89
Msh3-201ENSMUST00000022220 Lime1Q9EQR5 269 aa9.47□□□□□ -0.89
Msh3-201ENSMUST00000022220 Olfr548-ps1A0A1B0GSG0 314 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 E030025P04RikA2A6V5 185 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Gm14403A2BFU4 402 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Olfr102B2RT33 308 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Gm9964E9Q9S5 144 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Sh2d1bO35324 132 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Tcf21O35437 179 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Rpl29P47915 160 aaKnown RBP9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Rps23P62267 143 aaKnown RBP9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Zfp872Q3UVL3 465 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Rdh9Q8K5C8 317 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Tceal8Q9CZY2 117 aa9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 StrapQ9Z1Z2 350 aaKnown RBP9.46□□□□□ -0.89
Msh3-201ENSMUST00000022220 Fcgr4A0A0B4J1G0 249 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm35060A0A140LIV7 231 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cdc34bA0A140T8I4 237 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1289A0A288CFY5 326 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gdf1P20863 357 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lyl1P27792 278 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 FusP56959 518 aaKnown RBP9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 SspnQ62147 216 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tle1Q62440 770 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr453Q7TRV7 317 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ppp1r14dQ7TT52 146 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gucd1Q8BZI6 239 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm10283Q8C3L5 117 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1420Q8VF55 309 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr980Q8VH08 310 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ms4a6bQ99N09 244 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rab27bQ99P58 218 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tstd3Q9D0B5 157 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Lysmd2Q9D7V2 215 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Adam11Q9R1V4 773 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Crybb1Q9WVJ5 250 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr588-ps1A0A1B0GSZ2 313 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zdhhc22A0PK84 263 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 IfnabL7MTU6 190 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Aqp7O54794 303 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Fpr2O88536 351 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tcl1b1P56840 116 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm826Q3UQ74 109 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Tspan7Q62283 249 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1341Q7TQV4 312 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr180Q7TS48 317 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Depp1Q8K2F3 205 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr480Q8VEZ0 312 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr508Q8VG42 310 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr1201Q8VGF5 307 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rab4bQ91ZR1 213 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Hspb2Q99PR8 182 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gins3Q9CY94 216 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rhebl1Q9D8T3 184 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr878Q9EQA9 314 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Trex2Q9R1A9 236 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Pus1Q9WU56 423 aa9.46□□□□□ -0.9
Msh3-201ENSMUST00000022220 Cdh23Q99PF4 3354 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vmn1r204I7HIK1 302 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vmn1r80L7N1Z3 308 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gm3486L7N2D0 199 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Dhrs3O88876 302 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mdh2P08249 338 aaKnown RBP9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Csn2P10598 231 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Zfp11P10751 647 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Mtch2Q791V5 303 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rbm14Q8C2Q3 669 aaKnown RBP9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vrk3Q8K3G5 453 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr829Q8VGX1 321 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Rgs19Q9CX84 216 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ergic1Q9DC16 290 aaKnown RBP9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Gpr34Q9R1K6 375 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Atoh7Q9Z2E5 149 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Arfgef3Q3UGY8 2170 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 4930444P10RikD3YUR1 185 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Efnb2P52800 336 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vmn1r236Q05A06 334 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Foxr2Q3UM89 302 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Npy4rQ61041 375 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 4930451G09RikQ8C5G4 195 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Nt5mQ8VCE6 220 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr50Q8VGK5 312 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ms4a4dQ99N05 225 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 GhsrQ99P50 364 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ccdc198Q9CPZ1 294 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Sft2d3Q9CSV6 209 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Defb3Q9WTL0 63 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr221B2RVX8 311 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Psg20E9Q9B4 475 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Stfa1P35175 97 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 LtbP41155 306 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Ier3P46694 153 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Htr2bQ02152 479 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 MENTQ569E4 350 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Vgll4Q80V24 287 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr137Q8VFC2 312 aa9.45□□□□□ -0.9
Msh3-201ENSMUST00000022220 Olfr279Q8VFD8 310 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms