RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 FXYD3Q14802 87 aa20.85■□□□□ 0.93
VEGFA-231ENST00000640499 TMEM229BQ8NBD8 167 aa20.85■□□□□ 0.93
VEGFA-231ENST00000640499 DPPA5A6NC42 116 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 ELANEP08246 267 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 TSPAN5P62079 268 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 MRPS10P82664 201 aaKnown RBP20.84■□□□□ 0.93
VEGFA-231ENST00000640499 PRSS8Q16651 343 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 ACTBL2Q562R1 376 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 KHDC1LQ5JSQ8 128 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 LHFPL1Q86WI0 220 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 OR4S2Q8NH73 311 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 MYOZ3Q8TDC0 251 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 ZFP57Q9NU63 452 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 A3GALT2U3KPV4 340 aa20.84■□□□□ 0.93
VEGFA-231ENST00000640499 ECSCRQ19T08 205 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 VMA21Q3ZAQ7 101 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 SPAG16Q8N0X2 631 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 LFNGQ8NES3 379 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 OR4F17Q8NGA8 305 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 ARPC1AQ92747 370 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 OR4F4Q96R69 305 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 RSRP1Q9BUV0 290 aa20.83■□□□□ 0.93
VEGFA-231ENST00000640499 GSTZ1O43708 216 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF735P0CB33 412 aa20.82■□□□□ 0.92
VEGFA-231ENST00000640499 SSBP1Q04837 148 aaKnown RBP20.82■□□□□ 0.92
VEGFA-231ENST00000640499 RNASE10Q5GAN6 216 aaKnown RBP20.82■□□□□ 0.92
VEGFA-231ENST00000640499 ASPHD1Q5U4P2 390 aa20.82■□□□□ 0.92
VEGFA-231ENST00000640499 ETV3LQ6ZN32 361 aa20.82■□□□□ 0.92
VEGFA-231ENST00000640499 PUSL1Q8N0Z8 303 aaKnown RBP20.82■□□□□ 0.92
VEGFA-231ENST00000640499 OR51H1Q8NH63 302 aa20.82■□□□□ 0.92
VEGFA-231ENST00000640499 RABL2AQ9UBK7 228 aaPredicted RBP20.82■□□□□ 0.92
VEGFA-231ENST00000640499 RABL2BQ9UNT1 228 aa20.82■□□□□ 0.92
VEGFA-231ENST00000640499 FABP12A6NFH5 140 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 GPR31O00270 319 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 RBFOX2O43251 390 aaKnown RBP eCLIP20.81■□□□□ 0.925e-9■□□□□ 10.6
VEGFA-231ENST00000640499 UCP3P55916 312 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 GNB1P62873 340 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 AKIRIN2Q53H80 203 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 CXorf66Q5JRM2 361 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-231ENST00000640499 GRPEL2Q8TAA5 225 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 ABHD5Q8WTS1 349 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 CASTOR1Q8WTX7 329 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 MRGPRFQ96AM1 343 aa20.81■□□□□ 0.92
VEGFA-231ENST00000640499 DGCR14Q96DF8 476 aaKnown RBP20.81■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF430Q9H8G1 570 aaPredicted RBP20.81■□□□□ 0.92
VEGFA-231ENST00000640499 TBPP20226 339 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 KIR2DS2P43631 304 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 TAS2R19P59542 299 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 STEAP1BQ6NZ63 245 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 UNQ5815/PRO19632Q6UWF5 114 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 C8orf86Q6ZUL3 223 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 V9GYH0 126 aa20.8■□□□□ 0.92
VEGFA-231ENST00000640499 A0A1W2PN81 502 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 RLN1P04808 185 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 CHRNA7P36544 502 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 CDX1P47902 265 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-231ENST00000640499 CATR1Q13166 79 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF585BQ52M93 769 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 PHLDA2Q53GA4 152 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 FAAP20Q6NZ36 180 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 RHOVQ96L33 236 aa20.79■□□□□ 0.92
VEGFA-231ENST00000640499 FOXA2Q9Y261 457 aaPredicted RBP20.79■□□□□ 0.92
VEGFA-231ENST00000640499 OR2A4O95047 310 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 CNIH1O95406 144 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 RAB3DO95716 219 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 IL6RP08887 468 aaPredicted RBP20.78■□□□□ 0.92
VEGFA-231ENST00000640499 RAB9AP51151 201 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 CCDC190Q86UF4 302 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF695Q8IW36 515 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 ARRDC1Q8N5I2 433 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 KLHL30-AS1Q8NEE0 82 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 TMEM167AQ8TBQ9 72 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 BORCS5Q969J3 196 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 OR2A7Q96R45 310 aa20.78■□□□□ 0.92
VEGFA-231ENST00000640499 IFNA6P05013 189 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 PF4V1P10720 104 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 TMEM267Q0VDI3 215 aaPredicted RBP20.77■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF79Q15937 498 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 C10orf55Q5SWW7 151 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 TCTEX1D1Q8N7M0 179 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 ZNF491Q8N8L2 437 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 WFDC9Q8NEX5 89 aa20.77■□□□□ 0.92
VEGFA-231ENST00000640499 NOTCH1P46531 2555 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 MEGF8Q7Z7M0 2845 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 MSGN1A6NI15 193 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 E7EUB6 86 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 KBTBD11O94819 623 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 S1PR2O95136 353 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 HPRT1P00492 218 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 F2RP25116 425 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 TNXAQ16473 311 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 POU2AF1Q16633 256 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 LPCAT3Q6P1A2 487 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 SSX9Q7RTT3 188 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 CMTM1Q8IZ96 169 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 SLC38A6Q8IZM9 456 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 RAX2Q96IS3 184 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 DUX3Q96PT4 197 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 GNB4Q9HAV0 340 aa20.76■□□□□ 0.91
VEGFA-231ENST00000640499 A0A1B0GW64 132 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms