RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 P2RY6Q15077 328 aa15.78■□□□□ 0.12
SCARB2-213ENST00000638680 KLF14Q8TD94 323 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-213ENST00000638680 DPRXA6NFQ7 191 aa15.78■□□□□ 0.12
SCARB2-213ENST00000638680 SRP19P09132 144 aaKnown RBP15.78■□□□□ 0.12
SCARB2-213ENST00000638680 PRR7Q8TB68 274 aa15.78■□□□□ 0.12
SCARB2-213ENST00000638680 MIEN1Q9BRT3 115 aa15.78■□□□□ 0.12
SCARB2-213ENST00000638680 WNT10AQ9GZT5 417 aa15.78■□□□□ 0.12
SCARB2-213ENST00000638680 IGLV3-21P80748 117 aaPredicted RBP15.78■□□□□ 0.12
SCARB2-213ENST00000638680 SPAARA0A1B0GVQ0 90 aa15.77■□□□□ 0.12
SCARB2-213ENST00000638680 ARF6P62330 175 aa15.77■□□□□ 0.12
SCARB2-213ENST00000638680 FAM53AQ6NSI3 398 aaPredicted RBP15.77■□□□□ 0.12
SCARB2-213ENST00000638680 PSG9Q00887 426 aa15.77■□□□□ 0.12
SCARB2-213ENST00000638680 NPCDR1Q9BY65 106 aa15.77■□□□□ 0.12
SCARB2-213ENST00000638680 IGHV3-48P01763 117 aa15.77■□□□□ 0.11
SCARB2-213ENST00000638680 RPS20P60866 119 aaKnown RBP15.77■□□□□ 0.11
SCARB2-213ENST00000638680 RIPPLY2Q5TAB7 128 aa15.77■□□□□ 0.11
SCARB2-213ENST00000638680 BTCP35070 178 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 CX3CL1P78423 397 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 TM4SF20Q53R12 229 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 SLC25A45Q8N413 288 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 MRPL32Q9BYC8 188 aaKnown RBP15.76■□□□□ 0.11
SCARB2-213ENST00000638680 PLXNB2O15031 1838 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 LOC390937A0A1W2PQ73 354 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 IMMP2LQ96T52 175 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 IL6RP08887 468 aaPredicted RBP15.76■□□□□ 0.11
SCARB2-213ENST00000638680 HERPUD1Q15011 391 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 ZNF146Q15072 292 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 C19orf24Q9BVV8 132 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 CKAP5Q14008 2032 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 C10orf128Q5T292 105 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 MBNL2Q5VZF2 373 aaKnown RBP15.76■□□□□ 0.11
SCARB2-213ENST00000638680 ERASQ7Z444 233 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 OR5P3Q8WZ94 311 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 WDYHV1Q96HA8 205 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 KLK15Q9H2R5 256 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 ANKRD31Q8N7Z5 1873 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 GPR6P46095 362 aaPredicted RBP15.76■□□□□ 0.11
SCARB2-213ENST00000638680 PMCHL2Q9BQD1 86 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 SFXN3Q9BWM7 321 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 TMEM56-RWDD3S4R434 201 aa15.76■□□□□ 0.11
SCARB2-213ENST00000638680 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 SLC17A3O00476 420 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 COX5BP10606 129 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 HBBP68871 147 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 SYT8Q8NBV8 401 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 OR4D5Q8NGN0 318 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 HS3ST3B1Q9Y662 390 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 PRR33A8MZF0 331 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 PTGDSP41222 190 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 GOLT1AQ6ZVE7 132 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 FGF5P12034 268 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 NPIPB3Q92617 1050 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 TMEM70Q9BUB7 260 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 GDF9O60383 454 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 SS18L1O75177 396 aaPredicted RBP15.75■□□□□ 0.11
SCARB2-213ENST00000638680 COX6A1P12074 109 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 LGALS3P17931 250 aaKnown RBP15.75■□□□□ 0.11
SCARB2-213ENST00000638680 TFF3Q07654 80 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 EBLN2Q6P2I7 272 aa15.75■□□□□ 0.11
SCARB2-213ENST00000638680 NPIPB7O75200 414 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 MFAP4P55083 255 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TM2D1Q9BX74 207 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 PHLDA3Q9Y5J5 127 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 IGKV1D-43A0A0B4J1Z2 117 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 FAM106CPP0CH98 169 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 NR2C2APQ86WQ0 139 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 C14orf144Q96I85 54 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TMEM74BQ9NUR3 256 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 IGKV3D-15A0A087WSY6 115 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 RAMP1O60894 148 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 IGKV3-15P01624 115 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 PMS2CLQ68D20 193 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TCF24Q7RTU0 167 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 FOXA3P55318 350 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 PEAR1Q5VY43 1037 aaPredicted RBP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 IL36BQ9NZH7 164 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TBL2Q9Y4P3 447 aaKnown RBP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TDRD15B5MCY1 1934 aaKnown RBP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 RBFOX2O43251 390 aaKnown RBP eCLIP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 SRSF3P84103 164 aaKnown RBP15.74■□□□□ 0.11
SCARB2-213ENST00000638680 PRSS8Q16651 343 aa15.74■□□□□ 0.11
SCARB2-213ENST00000638680 TRIP12Q14669 1992 aaPredicted RBP15.73■□□□□ 0.11
SCARB2-213ENST00000638680 LINC00587B1AMM8 73 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 SCGB1A1P11684 91 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 LCN2P80188 198 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 RPL39P5Q59GN2 51 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 DMRTA1Q5VZB9 504 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 UNQ5815/PRO19632Q6UWF5 114 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 RAXQ9Y2V3 346 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 NPIPB13A6NJU9 1138 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 NPIPB4C9JG80 1138 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 AMMECR1LQ6DCA0 310 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 PCSK4Q6UW60 755 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 CLDND2Q8NHS1 167 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 CCL21O00585 134 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 MOSP00540 346 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 IGKV3-11P04433 115 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 DLX6P56179 175 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 C19orf54Q5BKX5 351 aa15.73■□□□□ 0.11
SCARB2-213ENST00000638680 LINC00305Q7Z4B0 112 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms