RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 LOC102723996A0A087X1L8 192 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 GRIFINA4D1Z8 144 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 PPIHO43447 177 aaKnown RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 GNB2P62879 340 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 QRFPP83859 136 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 CYP2G1PQ6ZSU1 146 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 CBY3A6NI87 242 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 FAM90A27PA6NNH2 459 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 COLCA2A8K830 154 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 M0QZK8 103 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 GGCTO75223 188 aaKnown RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF137PP52743 207 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 PQLC2Q6ZP29 291 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF525Q8N782 197 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 YTHDF2Q9Y5A9 579 aaKnown RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 INSIG2Q9Y5U4 225 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 C17orf98A8MV24 154 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 HIST1H1EP10412 219 aaKnown RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 PAFAH1B2P68402 229 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 PERPQ96FX8 193 aa14.12□□□□□ -0.15
SCARB2-210ENST00000638567 QTRT1Q9BXR0 403 aaKnown RBP14.12□□□□□ -0.15
SCARB2-210ENST00000638567 PLXND1Q9Y4D7 1925 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF716A6NP11 495 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 HOXA5P20719 270 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 CRYGSP22914 178 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 ID3Q02535 119 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 ICAM4Q14773 271 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 KIAA1644Q3SXP7 199 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 ANAPC1Q9H1A4 1944 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 SMPD2O60906 423 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 FXYD3Q14802 87 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 ASCL3Q9NQ33 180 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 IBA57Q5T440 356 aaKnown RBP14.11□□□□□ -0.15
SCARB2-210ENST00000638567 STXBP6Q8NFX7 210 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 NABP1Q96AH0 204 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 NPCDR1Q9BY65 106 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 MRPL18Q9H0U6 180 aaKnown RBP14.11□□□□□ -0.15
SCARB2-210ENST00000638567 PRDM6Q9NQX0 595 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 AUP1Q9Y679 476 aa14.11□□□□□ -0.15
SCARB2-210ENST00000638567 IGHV3-72A0A0B4J1Y9 119 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 CEACAM18A8MTB9 384 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 CRYBB3P26998 211 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 TFF3Q07654 80 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 NRN1LQ496H8 165 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 ZNRF1Q8ND25 227 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF596Q8TC21 504 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 IGKV1-27A0A075B6S5 117 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 SLC35E4Q6ICL7 350 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 GCSAMQ8N6F7 178 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 ELOVL1Q9BW60 279 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 TMEM191AQ9H0A3 160 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 RPLP1P05386 114 aaKnown RBP14.1□□□□□ -0.15
SCARB2-210ENST00000638567 FOXC1Q12948 553 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 ABLIM2Q6H8Q1 611 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 TMEM183AQ8IXX5 376 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 OR4D5Q8NGN0 318 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 SDF2L1Q9HCN8 221 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 A0A087WWC5 75 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 KLF7O75840 302 aaPredicted RBP14.1□□□□□ -0.15
SCARB2-210ENST00000638567 WISP1O95388 367 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 MT-ND6P03923 174 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 PNRC2Q9NPJ4 139 aaKnown RBP14.1□□□□□ -0.15
SCARB2-210ENST00000638567 DEPPQ9NTK1 212 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 JPT1Q9UK76 154 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 WASHC3Q9Y3C0 194 aa14.1□□□□□ -0.15
SCARB2-210ENST00000638567 FER1L5A0AVI2 2057 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 C16orf97H3BN30 126 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 BMPR1BO00238 502 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 LRTM2Q8N967 370 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PLPPR1Q8TBJ4 325 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 DCTN5Q9BTE1 182 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 FOXD3Q9UJU5 478 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PPIAL4EA0A075B759 164 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PPIAL4DF5H284 164 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PPIAL4FP0DN26 164 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 HOXB1P14653 301 aaPredicted RBP14.09□□□□□ -0.15
SCARB2-210ENST00000638567 RPL39P5Q59GN2 51 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 C1orf174Q8IYL3 243 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF524Q96C55 264 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 RASL11BQ9BPW5 248 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PPIAL4AQ9Y536 164 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 ZNF407Q9C0G0 2248 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 PSG7Q13046 419 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 NHLRC2Q8NBF2 726 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 CBLN4Q9NTU7 201 aa14.09□□□□□ -0.15
SCARB2-210ENST00000638567 ISLRO14498 428 aa14.08□□□□□ -0.15
SCARB2-210ENST00000638567 RPL8P62917 257 aaKnown RBP14.08□□□□□ -0.15
SCARB2-210ENST00000638567 SRSF4Q08170 494 aaKnown RBP14.08□□□□□ -0.15
SCARB2-210ENST00000638567 ZDHHC8Q9ULC8 765 aa14.08□□□□□ -0.15
SCARB2-210ENST00000638567 GNG7O60262 68 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 CBLN1P23435 193 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 HCP5Q6MZN7 132 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 FAM222BQ8WU58 562 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 SFRP2Q96HF1 295 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 RFNGQ9Y644 331 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 DIDO1Q9BTC0 2240 aaKnown RBP14.08□□□□□ -0.16
SCARB2-210ENST00000638567 CD3EP07766 207 aa14.08□□□□□ -0.16
SCARB2-210ENST00000638567 FOXG1P55316 489 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-210ENST00000638567 SPSB4Q96A44 273 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms