RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 IDO2Q6ZQW0 420 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 SLC35E3Q7Z769 313 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 SPAG16Q8N0X2 631 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 KLHDC1Q8N7A1 406 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 C3orf56Q8N813 242 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 DUSP18Q8NEJ0 188 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 OR13C8Q8NGS7 320 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 SGMS2Q8NHU3 365 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 CLCC1Q96S66 551 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 PRRT1Q99946 306 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 TPSG1Q9NRR2 321 aa13.61□□□□□ -0.23
CLN6-218ENST00000637223 LINC00854A0A1B0GVQ3 168 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 SPDEFO95238 335 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 IGHG2P01859 326 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 S100GP29377 79 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 LGALS7P47929 136 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 LIN54Q6MZP7 749 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 TBC1D26Q86UD7 250 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 OSR1Q8TAX0 266 aaPredicted RBP13.6□□□□□ -0.23
CLN6-218ENST00000637223 WFDC12Q8WWY7 111 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 SLC2A9Q9NRM0 540 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 SLC2A8Q9NY64 477 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 LINC00527Q9UJ94 153 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 SCP2D1Q9UJQ7 156 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 MGAM2Q2M2H8 2515 aa13.6□□□□□ -0.23
CLN6-218ENST00000637223 FCN1O00602 326 aa13.59□□□□□ -0.23
CLN6-218ENST00000637223 HLA-DRB1P01911 266 aa13.59□□□□□ -0.23
CLN6-218ENST00000637223 KRTAP10-3P60369 221 aa13.59□□□□□ -0.23
CLN6-218ENST00000637223 SRSF4Q08170 494 aaKnown RBP13.59□□□□□ -0.23
CLN6-218ENST00000637223 VKORC1L1Q8N0U8 176 aa13.59□□□□□ -0.23
CLN6-218ENST00000637223 ZFAND1Q8TCF1 268 aa13.59□□□□□ -0.23
CLN6-218ENST00000637223 ZNF486Q96H40 463 aaPredicted RBP13.59□□□□□ -0.23
CLN6-218ENST00000637223 NOL4LQ96MY1 436 aaPredicted RBP13.59□□□□□ -0.23
CLN6-218ENST00000637223 CTSDP07339 412 aaPredicted RBP13.58□□□□□ -0.24
CLN6-218ENST00000637223 SLC6A1P30531 599 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 ECI1P42126 302 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 PIGPP57054 158 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 UBE2KP61086 200 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 VMA21Q3ZAQ7 101 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 WNT10AQ9GZT5 417 aa13.58□□□□□ -0.24
CLN6-218ENST00000637223 TENM1Q9UKZ4 2725 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 IGHV7-81A0A0B4J1V7 117 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 MPPED1O15442 326 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 RBFOX2O43251 390 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLN6-218ENST00000637223 S1PR2O95136 353 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 CA2P00918 260 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 CRYGBP07316 175 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 SAA1P0DJI8 122 aaPredicted RBP13.57□□□□□ -0.24
CLN6-218ENST00000637223 F2RP25116 425 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 RND3P61587 244 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 SURF2Q15527 256 aaPredicted RBP13.57□□□□□ -0.24
CLN6-218ENST00000637223 PDLIM3Q53GG5 364 aaPredicted RBP13.57□□□□□ -0.24
CLN6-218ENST00000637223 HIST2H2BDQ6DRA6 164 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 SSX9Q7RTT3 188 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 NRARPQ7Z6K4 114 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 FOXRED2Q8IWF2 684 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 C11orf44Q8N8P7 122 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 ENKURQ8TC29 256 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 ZNF747Q9BV97 191 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 PARP11Q9NR21 331 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 C14orf166Q9Y224 244 aaKnown RBP13.57□□□□□ -0.24
CLN6-218ENST00000637223 TGP01266 2768 aa13.57□□□□□ -0.24
CLN6-218ENST00000637223 FAM240BA0A1B0GVZ2 78 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 HPRT1P00492 218 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 LPAR6P43657 344 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 GNB1P62873 340 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 CX3CL1P78423 397 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 NDPQ00604 133 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 PJVKQ0ZLH3 352 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 CENPVQ7Z7K6 275 aaPredicted RBP13.56□□□□□ -0.24
CLN6-218ENST00000637223 PPP1R27Q86WC6 154 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 CCDC71LQ8N9Z2 235 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 TEX45Q8NA69 505 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 CD300LFQ8TDQ1 290 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 ABHD5Q8WTS1 349 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 RTBDNQ9BSG5 229 aaPredicted RBP13.56□□□□□ -0.24
CLN6-218ENST00000637223 OR51J1Q9H342 316 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 C5orf66Q9H5L9 145 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 VSIG4Q9Y279 399 aa13.56□□□□□ -0.24
CLN6-218ENST00000637223 AP4M1O00189 453 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 ATP6V0E1O15342 81 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 HRASP01112 189 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 RPA2P15927 270 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 ZNF585BQ52M93 769 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 PLET1Q6UQ28 207 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 C10orf99Q6UWK7 81 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 STPG2Q8N412 459 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 RHOVQ96L33 236 aa13.55□□□□□ -0.24
CLN6-218ENST00000637223 ARPC1BO15143 372 aaKnown RBP13.54□□□□□ -0.24
CLN6-218ENST00000637223 NQO2P16083 231 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 CCR6P51684 374 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 TAS2R31P59538 309 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 PRSS8Q16651 343 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 MRGPRG-AS1Q2M3A8 158 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 ZNF329Q86UD4 541 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 TCTEX1D1Q8N7M0 179 aa13.54□□□□□ -0.24
CLN6-218ENST00000637223 ADAD2Q8NCV1 583 aaKnown RBP13.54□□□□□ -0.24
CLN6-218ENST00000637223 WIPF2Q8TF74 440 aaPredicted RBP13.54□□□□□ -0.24
CLN6-218ENST00000637223 SCGB3A2Q96PL1 93 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms