RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 RND2P52198 227 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 TCF23Q7RTU1 214 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 C9orf106Q8NAJ2 232 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 FDCSPQ8NFU4 85 aa11.69□□□□□ -0.54
CACNA1A-228ENST00000636610 NPIPB11E5RHQ5 1161 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 AMBPP02760 352 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 PFN1P07737 140 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 CSMD1Q96PZ7 3565 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 A0A087X0M5 115 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 A0A1B0GX30 115 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 A0A1W2PPV4 95 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 AQP7O14520 342 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 SNRPCP09234 159 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 PMS2P11Q13670 270 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 OTOGLQ3ZCN5 2332 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 ASPHD1Q5U4P2 390 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 DUX4L9Q6RFH8 374 aaPredicted RBP11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 PMS2P5A8MQ11 134 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
CACNA1A-228ENST00000636610 AKAP13Q12802 2813 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 ACTL6BO94805 426 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 GCH1P30793 250 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNF83P51522 516 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNF134P52741 427 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 USF2Q15853 346 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 GMPPAQ96IJ6 420 aaPredicted RBP11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 P2RX4Q99571 388 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 KMT2EQ8IZD2 1858 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 ZNF320A2RRD8 509 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 C15orf62A8K5M9 175 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 IQCF6A8MYZ5 107 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 SLC31A2O15432 143 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 SPRY3O43610 288 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 SPINK4O60575 86 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 CD1BP29016 333 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 OR4A16Q8NH70 328 aa11.67□□□□□ -0.54
CACNA1A-228ENST00000636610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 CLDN14O95500 239 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 PRDX2P32119 198 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 GNB1P62873 340 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 MSMPQ1L6U9 139 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 OR1P1Q8NH06 330 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 Q8TCH9 128 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 NEIL1Q96FI4 390 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 ANKRD11Q6UB99 2663 aaPredicted RBP11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 GRIFINA4D1Z8 144 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 CD82P27701 267 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 TNFSF10P50591 281 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 SPATA31B1PQ5VZV4 182 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 MRPL41Q8IXM3 137 aaKnown RBP11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 AGMATQ9BSE5 352 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
CACNA1A-228ENST00000636610 C19orf67A6NJJ6 358 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 SPINT2O43291 252 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 DDTP30046 118 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 KIR2DL2P43627 348 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 PDLIM3Q53GG5 364 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 TMEM178AQ8NBL3 297 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 SRD5A3Q9H8P0 318 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 OR6C3Q9NZP0 311 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 TET2Q6N021 2002 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 TMEM265A0A087WTH1 108 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 ELOA3CA0A087WX78 387 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 SP9P0CG40 484 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 WT1P19544 449 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 GNG10P50151 68 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 Q6ZT83 130 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 MOB3BQ86TA1 216 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 WDR31Q8NA23 367 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 CXXC4Q9H2H0 198 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 MS4A5Q9H3V2 200 aa11.65□□□□□ -0.54
CACNA1A-228ENST00000636610 GZMBP10144 247 aa11.65□□□□□ -0.55
CACNA1A-228ENST00000636610 NUBP1P53384 320 aa11.65□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.55
CACNA1A-228ENST00000636610 RPRMLQ8N4K4 120 aa11.65□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM242Q9NWH2 141 aa11.65□□□□□ -0.55
CACNA1A-228ENST00000636610 SCO2A0A1W2PP80 73 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 SLC17A3O00476 420 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 RBFOX2O43251 390 aaKnown RBP eCLIP11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 HRASP01112 189 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 GATA2P23769 480 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 SMIM21Q3B7S5 101 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 SLC35E4Q6ICL7 350 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 MOGAT3Q86VF5 341 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 TMEM256Q8N2U0 113 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 SNRNP40Q96DI7 357 aaKnown RBP11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 FAM90A26D6RGX4 464 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 TSTD3H0UI37 97 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 FOXH1O75593 365 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 FRMD6-AS1P0C7T7 363 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 P0C879 139 aa11.64□□□□□ -0.55
CACNA1A-228ENST00000636610 DBX2Q6ZNG2 339 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms