RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 ZMAT5Q9UDW3 170 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 DEFB108AA8MXU0 73 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 PLGLAQ15195 96 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 AGMATQ9BSE5 352 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 NPCDR1Q9BY65 106 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 FOXA2Q9Y261 457 aaPredicted RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 HEATR5AQ86XA9 2040 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 C11orf94C9JXX5 98 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 NXPH3O95157 252 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 LGALS4P56470 323 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RUNX1Q01196 453 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 LINC00311Q8N616 119 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RPEQ96AT9 228 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 C1RLQ9NZP8 487 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RPL29P47914 159 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 FOXF2Q12947 444 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM144Q7Z5S9 345 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 SDK1Q7Z5N4 2213 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RBP4P02753 201 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 PRCDQ00LT1 54 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 ALKBH6Q3KRA9 238 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 CBLN2Q8IUK8 224 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 CCL13Q99616 98 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 KAAG1Q9UBP8 84 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RALYQ9UKM9 306 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 C17orf98A8MV24 154 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 WNT9BO14905 357 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 FSTL3O95633 263 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 IGHV1-46P01743 117 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 MT-ND6P03923 174 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RPL35P42766 123 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 CNN1P51911 297 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 ZNF474Q6S9Z5 364 aaPredicted RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 BTNL3Q6UXE8 466 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 RBM14Q96PK6 669 aaKnown RBP3.8□□□□□ -1.8
SCN1A-210ENST00000635776 WFDC1Q9HC57 220 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 LY96Q9Y6Y9 160 aa3.8□□□□□ -1.8
SCN1A-210ENST00000635776 TRAV39A0A0B4J263 110 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 IGHV3-64DA0A0J9YX35 117 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 WDR86Q86TI4 376 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CA5BP1Q8WTZ4 195 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 UPK2O00526 184 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 EFNB3Q15768 340 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 FAM24BQ8N5W8 94 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CCL17Q92583 94 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 RAB24Q969Q5 203 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 FZR1Q9UM11 496 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 IGHV1-69-2A0A0G2JMI3 117 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CD177Q8N6Q3 437 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 HIST1H2BAQ96A08 127 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 ACY3Q96HD9 319 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SRSF8Q9BRL6 282 aaKnown RBP3.79□□□□□ -1.8
SCN1A-210ENST00000635776 PATZ1Q9HBE1 687 aaKnown RBP3.79□□□□□ -1.8
SCN1A-210ENST00000635776 DOK5Q9P104 306 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 DKK4Q9UBT3 224 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 PXMP4Q9Y6I8 212 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 ABCA1O95477 2261 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 OOSP1A8MZH6 123 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 C1QL1O75973 258 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 FAM27E3Q08E93 113 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 C2orf83Q53S99 150 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CYB561D1Q8N8Q1 229 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 UBALD1Q8TB05 177 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 IMMP2LQ96T52 175 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SPOCK3Q9BQ16 436 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SH3BGRL3Q9H299 93 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 PITPNC1Q9UKF7 332 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 Q6ZR03 302 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 OR2T10Q8NGZ9 312 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 K7ENP7 123 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 COX7A2P2O60397 106 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 AARDQ4LEZ3 155 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 STUMQ69YW2 141 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 C11orf1Q9H5F2 150 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SDF2L1Q9HCN8 221 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 GCM1Q9NP62 436 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SH3BGRL2Q9UJC5 107 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 IGKV1D-17A0A075B6S4 117 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 AKR1C3P42330 323 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 FHITP49789 147 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 RSPO4Q2I0M5 234 aaPredicted RBP3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SLC25A48Q6ZT89 311 aaKnown RBP3.79□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM167AQ8TBQ9 72 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 RSG1Q9BU20 258 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 SLC25A22Q9H936 323 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 METTL1Q9UBP6 276 aaKnown RBP3.79□□□□□ -1.8
SCN1A-210ENST00000635776 MEOX2P50222 304 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CCL8P80075 99 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 VWC2Q2TAL6 325 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 CYB5R2Q6BCY4 276 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 OR4A47Q6IF82 309 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 C20orf204Q6ZNR8 217 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 PNKDQ8N490 385 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 TEX45Q8NA69 505 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 TMEM18Q96B42 140 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 PERPQ96FX8 193 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 C20orf24Q9BUV8 137 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 FAM215AQ9Y5M1 114 aa3.79□□□□□ -1.8
SCN1A-210ENST00000635776 TRAV30A0A087WSZ9 112 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms