RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GAFA1Q96PS6 74 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 HIPK2Q9H2X6 1198 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 WFDC1Q9HC57 220 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 MTORP42345 2549 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 HMGB3O15347 200 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 PGLYRP1O75594 196 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 POLR2GP62487 172 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 Q71RC1 249 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 MRPL41Q8IXM3 137 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 CARHSP1Q9Y2V2 147 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 ZNF729A6NN14 1252 aaPredicted RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 C17orf112F2Z3M2 114 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 NUPL2O15504 423 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 RPS16P62249 146 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 BTNL8Q6UX41 500 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 ABHD12Q8N2K0 398 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 ZNF596Q8TC21 504 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 TP53RKQ96S44 253 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 IDI2-AS1Q9NZ38 188 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 IGKV1-6A0A0C4DH72 117 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 FAM24AA6NFZ4 105 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 KIR2DS2P43631 304 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 SSX9Q7RTT3 188 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 MRPL30Q8TCC3 161 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 HSD17B10Q99714 261 aaKnown RBP10.3□□□□□ -0.76
SYNGAP1-207ENST00000628646 IGHV4-61A0A0C4DH41 118 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 C9JQL5 133 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 UCP1P25874 307 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 RAB11AP62491 216 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 C11orf53Q8IXP5 236 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 CACNG5Q9UF02 275 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 NCBP2LA6PVI3 153 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 C12orf77C9JDV5 145 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 S100A6P06703 90 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 STUMQ69YW2 141 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 TGIF2LXQ8IUE1 241 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 ODF3L1Q8IXM7 274 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 SELENOHQ8IZQ5 122 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 UBAC2Q8NBM4 344 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 OR4D5Q8NGN0 318 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 ADTRPQ96IZ2 230 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 TLNRD1Q9H1K6 362 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 INSIG2Q9Y5U4 225 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 F2RL2O00254 374 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 SYNGR2O43760 224 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 MEF2CQ06413 473 aaPredicted RBP10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 RHEBQ15382 184 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 SSX2Q16385 188 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 SPANXN5Q5MJ07 72 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 RBMXL1Q96E39 390 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 RPUSD1Q9UJJ7 312 aaKnown RBP10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 LINC00312Q9Y6C7 94 aa10.29□□□□□ -0.76
SYNGAP1-207ENST00000628646 SULT1A2P50226 295 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 C21orf62-AS1Q17RA5 79 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CYB5R2Q6BCY4 276 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 TMEM182Q6ZP80 229 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 H1FOOQ8IZA3 346 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 OR10P1Q8NGE3 313 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 PINX1Q96BK5 328 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 SDSLQ96GA7 329 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 NKX6-2Q9C056 277 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CLEC18AA5D8T8 446 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CHST1O43916 411 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 PPT1P50897 306 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 TAS2R30P59541 319 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 ATP6V1FQ16864 119 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 RTL8BQ17RB0 113 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 ZNF66Q6ZN08 573 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 FGFRL1Q8N441 504 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CLEC18CQ8NCF0 446 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 LSM10Q969L4 123 aaKnown RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 ZNF251Q9BRH9 671 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 PARP11Q9NR21 331 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 SMCO3A2RU48 225 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CST7O76096 145 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CD5P06127 495 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 BRS3P32247 399 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 TMEM56Q96MV1 263 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 ABHD14AQ9BUJ0 271 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 CLEC7AQ9BXN2 247 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 KIAA1456Q9P272 454 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 TMEM56-RWDD3S4R434 201 aa10.28□□□□□ -0.76
SYNGAP1-207ENST00000628646 IGHV3-72A0A0B4J1Y9 119 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 CRYBA1P05813 215 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 MSMBP08118 114 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 CTRB1P17538 263 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 CFHR2P36980 270 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 CTRB2Q6GPI1 263 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 ZNF818PQ6ZRF7 136 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 LINC01356Q8N9X3 169 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 OR5C1Q8NGR4 320 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 C10orf105Q8TEF2 133 aa10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 SMG1Q96Q15 3661 aaKnown RBP10.27□□□□□ -0.76
SYNGAP1-207ENST00000628646 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms