RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 IL15RAQ13261 267 aa19.31■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.31■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF714Q96N38 554 aa19.31■□□□□ 0.68
CAPNS1-216ENST00000628306 A0A1W2PPH5 198 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 HMSDA8MTL9 139 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 CD28P10747 220 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 SP6Q3SY56 376 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 Q8N2B8 174 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 PDCD10Q9BUL8 212 aa19.3■□□□□ 0.68
CAPNS1-216ENST00000628306 C5orf51A6NDU8 294 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 RBP4P02753 201 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 SLC25A4P12235 298 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 RPA2P15927 270 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 HABP2Q14520 560 aaPredicted RBP19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 TMEM65Q6PI78 240 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 HSD17B10Q99714 261 aaKnown RBP19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 OR2D2Q9H210 308 aa19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 LIN7CQ9NUP9 197 aaKnown RBP19.29■□□□□ 0.68
CAPNS1-216ENST00000628306 SMLR1H3BR10 107 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 ADAP1O75689 374 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 DLX6P56179 175 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF273Q14593 569 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 NSUN5P1Q3KNT7 163 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 DYNAPQ8N1N2 210 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF439Q8NDP4 499 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 OR11H4Q8NGC9 324 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 COMMD9Q9P000 198 aa19.28■□□□□ 0.68
CAPNS1-216ENST00000628306 TENM3Q9P273 2699 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 A0A087X0M5 115 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 IGHV3-43A0A0B4J1X8 118 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 A0A1B0GX30 115 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 C17orf98A8MV24 154 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 IGHV3-43DP0DP04 118 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 ERVFRD-1P60508 538 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 CATR1Q13166 79 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 Q5BKY6 102 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 GGNBP1Q5YKI7 109 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF695Q8IW36 515 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 SELENOHQ8IZQ5 122 aaKnown RBP19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 ZNF596Q8TC21 504 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 RBPMSQ93062 196 aaKnown RBP19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 NPFFR1Q9GZQ6 430 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 PSG11Q9UQ72 335 aa19.27■□□□□ 0.68
CAPNS1-216ENST00000628306 C13orf42A0A1B0GVH6 325 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 CCSO14618 274 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 SERPINE2P07093 398 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 HOXB5P09067 269 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 VDAC1P21796 283 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 NKX2-5P52952 324 aaPredicted RBP19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 CT45A1Q5HYN5 189 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 CT45A3Q8NHU0 189 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 CD300LFQ8TDQ1 290 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 SEC22AQ96IW7 307 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 ZFP57Q9NU63 452 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 SDHAF2Q9NX18 166 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 RNF150Q9ULK6 438 aa19.26■□□□□ 0.67
CAPNS1-216ENST00000628306 FAM25EA8MYX2 175 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 FBXO24O75426 580 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 SLC25A6P12236 298 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 PSMB6P28072 239 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 ZNF134P52741 427 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 FAM53AQ6NSI3 398 aaPredicted RBP19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 SLC25A48Q6ZT89 311 aaKnown RBP19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 LYZL2Q7Z4W2 148 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 NDUFA11Q86Y39 141 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 LINC00311Q8N616 119 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 LHFPL5Q8TAF8 219 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 PPP1R1CQ8WVI7 109 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 WDR89Q96FK6 387 aaPredicted RBP19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 OR10C1Q96KK4 312 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 CITED2Q99967 270 aaPredicted RBP19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 ABHD14AQ9BUJ0 271 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 WNT10AQ9GZT5 417 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 IFI27L2Q9H2X8 130 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 PRR13Q9NZ81 148 aa19.25■□□□□ 0.67
CAPNS1-216ENST00000628306 RAB29O14966 203 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 GPR12P47775 334 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 LDLRAD2Q5SZI1 272 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 TMEM268Q5VZI3 342 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 LAMTOR1Q6IAA8 161 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 LHFPL4Q7Z7J7 247 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 C9orf62Q8N4C0 152 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 LSM10Q969L4 123 aaKnown RBP19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 SPIN2AQ99865 258 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 SPIN2BQ9BPZ2 258 aa19.24■□□□□ 0.67
CAPNS1-216ENST00000628306 ST8SIA5O15466 376 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 TNFSF12O43508 249 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 ATG12O94817 140 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 LTC4SQ16873 150 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 IAH1Q2TAA2 248 aaPredicted RBP19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 C11orf87Q6NUJ2 197 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 Q6ZS46 218 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 SLC35G3Q8N808 338 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 R3HDM4Q96D70 268 aa19.23■□□□□ 0.67
CAPNS1-216ENST00000628306 TRAV14DV4A0A0A6YYC5 116 aa19.22■□□□□ 0.67
CAPNS1-216ENST00000628306 MEX3AA1L020 520 aaKnown RBP19.22■□□□□ 0.67
CAPNS1-216ENST00000628306 RBFOX2O43251 390 aaKnown RBP eCLIP19.22■□□□□ 0.67
CAPNS1-216ENST00000628306 PROP1O75360 226 aa19.22■□□□□ 0.67
CAPNS1-216ENST00000628306 MMP23AO75900 390 aa19.22■□□□□ 0.67
CAPNS1-216ENST00000628306 MPC2O95563 127 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms