RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 POMT1Q9Y6A1 747 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 NBEAL1Q6ZS30 2694 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 K7EPK0 472 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 RBFOX2O43251 390 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 HPRT1P00492 218 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 KRASP01116 189 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 IGHV2-5P01817 119 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRR20EP86478 221 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRR20CP86479 221 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRR20DP86480 221 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRR20BP86481 221 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRR20AP86496 221 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PRB3Q04118 309 aaPredicted RBP7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 FAM71E2Q8N5Q1 922 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 Q8N7P7 452 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 PLEKHA2Q9HB19 425 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 RCL1Q9Y2P8 373 aaKnown RBP7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 MMP24Q9Y5R2 645 aa7.72□□□□□ -1.17
PDLIM5-223ENST00000627587 E5RGE8 158 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 TOR1AO14656 332 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 TGFAP01135 160 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 G6PCP35575 357 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 PAX2Q02962 417 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 DIAPH2-AS1Q14236 149 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 CXorf66Q5JRM2 361 aaPredicted RBP7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF833PQ6ZTB9 187 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 KCNRGQ8N5I3 272 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF383Q8NA42 475 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 DMBX1Q8NFW5 382 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 OR4S2Q8NH73 311 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 TNFRSF14Q92956 283 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 ST6GALNAC6Q969X2 333 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 TMEM186Q96B77 213 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 CACNG5Q9UF02 275 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 NSG2Q9Y328 171 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 SVEP1Q4LDE5 3571 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 WNK2Q9Y3S1 2297 aa7.71□□□□□ -1.18
PDLIM5-223ENST00000627587 IGHV2-26A0A0B4J1V2 119 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 KANTRA0A1W2PQU2 76 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 MARCH11A6NNE9 402 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 M0R1W7 72 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 WRBO00258 174 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 TCF21O43680 179 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CFDP00746 253 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 PVALBP20472 110 aaPredicted RBP7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 IL3RAP26951 378 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 PRRX1P54821 245 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 LMO4P61968 165 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ID3Q02535 119 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 FAM71F2Q6NXP2 309 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CLDND2Q8NHS1 167 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 R3HDM4Q96D70 268 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 AQP10Q96PS8 301 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CLEC7AQ9BXN2 247 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 COA4Q9NYJ1 87 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 PAIP2BQ9ULR5 123 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ENSAO43768 121 aaKnown RBP7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 TMEM50AO95807 157 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 IGLV1-47P01700 117 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CT45A6P0DMU7 189 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CT45A5P0DMU8 189 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 CT45A7P0DMV0 189 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 NQO2P16083 231 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ZNF137PP52743 207 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ERVK-16P61578 105 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ARF6P62330 175 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 POLR2GP62487 172 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 RTL8BQ17RB0 113 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 MIDNQ504T8 468 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 H2BFWTQ7Z2G1 175 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 OR8H1Q8NGG4 311 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 ZC4H2Q9NQZ6 224 aa7.7□□□□□ -1.18
PDLIM5-223ENST00000627587 TNCP24821 2201 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 IGHV4-61A0A0C4DH41 118 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 A8MXK9 166 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 BCL2L11O43521 198 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 SSSCA1O60232 199 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 NXPH3O95157 252 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 CRYZL1O95825 349 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 APOA2P02652 100 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 RPL12P30050 165 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 SRP14P37108 136 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 P2RY1P47900 373 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 VAMP2P63027 116 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 TAGLNQ01995 201 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 SCGB2A2Q13296 93 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 HLA-DRB5Q30154 266 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 LDLRAD2Q5SZI1 272 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 DHRS7BQ6IAN0 325 aaPredicted RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 TEX261Q6UWH6 196 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 SLC51BQ86UW2 128 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 KIR3DL3Q8N743 410 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 LINC01356Q8N9X3 169 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 BEND2Q8NDZ0 799 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 OR13D1Q8NGV5 346 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 MRPL20Q9BYC9 149 aaKnown RBP7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 MAGT1Q9H0U3 335 aa7.69□□□□□ -1.18
PDLIM5-223ENST00000627587 SLC35D1Q9NTN3 355 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms