RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 MFSD4AQ8N468 514 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 POC5Q8NA72 575 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 SECTM1Q8WVN6 248 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 TCTEX1D2Q8WW35 142 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 SCPEP1Q9HB40 452 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 COMMD3Q9UBI1 195 aa17.33■□□□□ 0.36
SF1-220ENST00000626028 SORL1Q92673 2214 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 RBFOX2O43251 390 aaKnown RBP eCLIP17.32■□□□□ 0.36
SF1-220ENST00000626028 RAMP3O60896 148 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 TPPPO94811 219 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 EIF4EP06730 217 aaKnown RBP17.32■□□□□ 0.36
SF1-220ENST00000626028 SAA1P0DJI8 122 aaPredicted RBP17.32■□□□□ 0.36
SF1-220ENST00000626028 PTHLHP12272 177 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 TPPP2P59282 170 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 RPL30P62888 115 aaKnown RBP17.32■□□□□ 0.36
SF1-220ENST00000626028 DCTN2Q13561 401 aaKnown RBP17.32■□□□□ 0.36
SF1-220ENST00000626028 DYRK1AQ13627 763 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 MRGPRG-AS1Q2M3A8 158 aa17.32■□□□□ 0.36
SF1-220ENST00000626028 ACTL6BO94805 426 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 HRASP01112 189 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 RHOVQ96L33 236 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 SLC5A7Q9GZV3 580 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 TAS2R8Q9NYW2 309 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 ADAM30Q9UKF2 790 aa17.31■□□□□ 0.36
SF1-220ENST00000626028 SULT1C2O00338 296 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 TRGV3P03979 118 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 ZNF182P17025 639 aaPredicted RBP17.3■□□□□ 0.36
SF1-220ENST00000626028 ALDH3B2P48448 385 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 KRTAP10-11P60412 298 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 HERV-K104P61576 105 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 CATR1Q13166 79 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 TNXAQ16473 311 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 CD300LFQ8TDQ1 290 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 SRSF12Q8WXF0 261 aaKnown RBP17.3■□□□□ 0.36
SF1-220ENST00000626028 SPIN2AQ99865 258 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 SPIN2BQ9BPZ2 258 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 ZNF430Q9H8G1 570 aaPredicted RBP17.3■□□□□ 0.36
SF1-220ENST00000626028 CCL28Q9NRJ3 127 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 EHFQ9NZC4 300 aa17.3■□□□□ 0.36
SF1-220ENST00000626028 MSGN1A6NI15 193 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 SEC14L6B5MCN3 397 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 LINC01619G3V211 115 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 OR2A4O95047 310 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 HSPB1P04792 205 aaKnown RBP17.29■□□□□ 0.36
SF1-220ENST00000626028 HOXD3P31249 432 aaPredicted RBP17.29■□□□□ 0.36
SF1-220ENST00000626028 MAS1LP35410 378 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 DGCR2P98153 550 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 ASPHD1Q5U4P2 390 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 GPR107Q5VW38 600 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 IDO2Q6ZQW0 420 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 GPR141Q7Z602 305 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 OR5H2Q8NGV7 314 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 GPX8Q8TED1 209 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 USMG5Q96IX5 58 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 OR2A7Q96R45 310 aa17.29■□□□□ 0.36
SF1-220ENST00000626028 MEIS3P1A6NDR6 274 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 KBTBD11O94819 623 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 FGF2P09038 288 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 BRWD1-AS2P59051 145 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 PUSL1Q8N0Z8 303 aaKnown RBP17.28■□□□□ 0.36
SF1-220ENST00000626028 OR5T1Q8NG75 326 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 OR4A5Q8NH83 315 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 TMEM167AQ8TBQ9 72 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 C15orf40Q8WUR7 153 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 MOB3AQ96BX8 217 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 MS4A10Q96PG2 267 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 OR5B12Q96R08 314 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 PHB2Q99623 299 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 TINAGL1Q9GZM7 467 aaPredicted RBP17.28■□□□□ 0.36
SF1-220ENST00000626028 ZNF355PQ9NSJ1 428 aa17.28■□□□□ 0.36
SF1-220ENST00000626028 C13orf42A0A1B0GVH6 325 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 ELK1P19419 428 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 RFX2P48378 723 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 FXYD4P59646 89 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 OR2B11Q5JQS5 317 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 SLC25A42Q86VD7 318 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 OR6F1Q8NGZ6 308 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 CASTOR1Q8WTX7 329 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 BCL7BQ9BQE9 202 aa17.27■□□□□ 0.36
SF1-220ENST00000626028 NAA50Q9GZZ1 169 aaKnown RBP17.27■□□□□ 0.36
SF1-220ENST00000626028 K7EIL1 84 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 OVOL1O14753 267 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 HPGDSO60760 199 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 OR9G9P0C7N8 305 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 GNRHRP30968 328 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 RCVRNP35243 200 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 TAS2R31P59538 309 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 ZNF429Q86V71 674 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 LYSMD2Q8IV50 215 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 SPAG16Q8N0X2 631 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 ADAD2Q8NCV1 583 aaKnown RBP17.26■□□□□ 0.35
SF1-220ENST00000626028 RANGRFQ9HD47 186 aaPredicted RBP17.26■□□□□ 0.35
SF1-220ENST00000626028 BET1LQ9NYM9 111 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 SCOCQ9UIL1 159 aa17.26■□□□□ 0.35
SF1-220ENST00000626028 MPPED1O15442 326 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 HPRT1P00492 218 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 FCER2P06734 321 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 ZP3P21754 424 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 POU2AF1Q16633 256 aa17.25■□□□□ 0.35
SF1-220ENST00000626028 LPCAT3Q6P1A2 487 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms