RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 UBE2KP61086 200 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 CATR1Q13166 79 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 CBX3Q13185 183 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 LPCAT3Q6P1A2 487 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 PPP1R27Q86WC6 154 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 FOXRED2Q8IWF2 684 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 OR5AU1Q8NGC0 362 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 MARCH1Q8TCQ1 289 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 CLCC1Q96S66 551 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 PTTG2Q9NZH5 202 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF580Q9UK33 172 aa11.25□□□□□ -0.61
CBWD3-217ENST00000621474 ARPC1BO15143 372 aaKnown RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 KIR2DS2P43631 304 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 PLGLAQ15195 96 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF585BQ52M93 769 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 C19orf54Q5BKX5 351 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF562Q6V9R5 426 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 LINC00299Q6ZSB3 139 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 TBC1D26Q86UD7 250 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 TOMM5Q8N4H5 51 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 GDPD1Q8N9F7 314 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 CHPT1Q8WUD6 406 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 HRASLSQ9HDD0 168 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 VWFP04275 2813 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 PSMB11A5LHX3 300 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 ADARB2-AS1A8MUL3 147 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 DISC1C4P0D8 188 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 G3V318 75 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 F2RP25116 425 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 PPIFP30405 207 aaKnown RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 CRIP2P52943 208 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 RND3P61587 244 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF45Q02386 682 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 CENPVQ7Z7K6 275 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 PUSL1Q8N0Z8 303 aaKnown RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 TEX45Q8NA69 505 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF486Q96H40 463 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 RTBDNQ9BSG5 229 aaPredicted RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
CBWD3-217ENST00000621474 C5orf66Q9H5L9 145 aa11.24□□□□□ -0.61
CBWD3-217ENST00000621474 S1PR2O95136 353 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 HPRT1P00492 218 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 PIGPP57054 158 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 CD83Q01151 205 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 RHOVQ96L33 236 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 PRRT1Q99946 306 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 CITED2Q99967 270 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-217ENST00000621474 ZNF430Q9H8G1 570 aaPredicted RBP11.23□□□□□ -0.61
CBWD3-217ENST00000621474 PARP11Q9NR21 331 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 GPR132Q9UNW8 380 aa11.23□□□□□ -0.61
CBWD3-217ENST00000621474 MPPED1O15442 326 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 FBXO24O75426 580 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 KBTBD11O94819 623 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 IL6RP08887 468 aaPredicted RBP11.22□□□□□ -0.61
CBWD3-217ENST00000621474 PGAM2P15259 253 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 SURF2Q15527 256 aaPredicted RBP11.22□□□□□ -0.61
CBWD3-217ENST00000621474 POU2AF1Q16633 256 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 PRSS8Q16651 343 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 VMA21Q3ZAQ7 101 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 SGMS2Q8NHU3 365 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 PLEKHA2Q9HB19 425 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 MCUBQ9NWR8 336 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 NUBP2Q9Y5Y2 271 aa11.22□□□□□ -0.61
CBWD3-217ENST00000621474 SOX15O60248 233 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 CTSDP07339 412 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-217ENST00000621474 IL7P13232 177 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 TAS2R31P59538 309 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 AP3S2P59780 193 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 SSX9Q7RTT3 188 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 MINDY2Q8NBR6 621 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 TP53RKQ96S44 253 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 WSB1Q9Y6I7 421 aa11.21□□□□□ -0.61
CBWD3-217ENST00000621474 PKD1L1Q8TDX9 2849 aa11.21□□□□□ -0.62
CBWD3-217ENST00000621474 MARCH11A6NNE9 402 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 OR2A4O95047 310 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 HRASP01112 189 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 IGHG4P01861 327 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 NQO2P16083 231 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 ECI1P42126 302 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 FXYD3Q14802 87 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 ASPHD1Q5U4P2 390 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 LCNL1Q6ZST4 164 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 TCTEX1D1Q8N7M0 179 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 POC5Q8NA72 575 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 ARPC1AQ92747 370 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 OR2A7Q96R45 310 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 FAM212BQ9NTI7 297 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-217ENST00000621474 BET1LQ9NYM9 111 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 COMMD9Q9P000 198 aa11.2□□□□□ -0.62
CBWD3-217ENST00000621474 SCP2D1Q9UJQ7 156 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms