RNA–Protein interactions for RNA: ENST00000619750.1

PCDHGA3-203, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA3, Length 2,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-203ENST00000619750 ZNF664Q8N3J9 261 aa11.94□□□□□ -0.5
PCDHGA3-203ENST00000619750 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
PCDHGA3-203ENST00000619750 NEIL1Q96FI4 390 aaPredicted RBP11.94□□□□□ -0.5
PCDHGA3-203ENST00000619750 OOEPA6NGQ2 149 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 PROP1O75360 226 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 P0C879 139 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 SELLP14151 372 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 MIC13Q5XKP0 118 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 ACP7Q6ZNF0 438 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 YLPM1P49750 1951 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 ZNF320A2RRD8 509 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 OR4A8P0C604 315 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 CD82P27701 267 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 PKIAP61925 76 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 MRPL41Q8IXM3 137 aaKnown RBP11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 Q8TCH9 128 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 DDA1Q9BW61 102 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 DUSP13Q9UII6 198 aa11.93□□□□□ -0.5
PCDHGA3-203ENST00000619750 GRIFINA4D1Z8 144 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 CLDN14O95500 239 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 PRAMEF5Q5TYX0 476 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 TMEM256Q8N2U0 113 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 ZNRF1Q8ND25 227 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 MISP3Q96FF7 219 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 SPTBN2O15020 2390 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 IQCF6A8MYZ5 107 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 M0R1X1 148 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 AQP7O14520 342 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 RBFOX2O43251 390 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 NUPR1O60356 82 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 ARL14EPLP0DKL9 152 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 IL3RAP26951 378 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 CD1BP29016 333 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 EIF4EBP1Q13541 118 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 VHLLQ6RSH7 139 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 Q8N7P7 452 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 LRRC29Q8WV35 223 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 ZPBPQ9BS86 351 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 HINT2Q9BX68 163 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 HEYLQ9NQ87 328 aaPredicted RBP11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 TACC2O95359 2948 aa11.92□□□□□ -0.5
PCDHGA3-203ENST00000619750 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 A0A1W2PPV4 95 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 CCL11P51671 97 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 GABRA6Q16445 453 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 HES3Q5TGS1 186 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 OR2Z1Q8NG97 314 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 OR6C3Q9NZP0 311 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 SCO2A0A1W2PP80 73 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 GPR12P47775 334 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 JOSD1Q15040 202 aaPredicted RBP11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 ASPHD1Q5U4P2 390 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 SPATA31B1PQ5VZV4 182 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 LINC01551Q86U37 167 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 IMMP2LQ96T52 175 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 AGMATQ9BSE5 352 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 TIMM9Q9Y5J7 89 aa11.91□□□□□ -0.5
PCDHGA3-203ENST00000619750 CECR9P0C854 216 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 C1orf229Q6ZS94 237 aaPredicted RBP11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 PTPRBP23467 1997 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 SLC31A2O15432 143 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 FRMD6-AS1P0C7T7 363 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 HOXC12P31275 282 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 ZNF134P52741 427 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 SSX2Q16385 188 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 SLC35E4Q6ICL7 350 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 ATG101Q9BSB4 218 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 MS4A5Q9H3V2 200 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 HES4Q9HCC6 221 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
PCDHGA3-203ENST00000619750 PIGBOS1A0A0B4J2F0 54 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 C21orf140B9A014 251 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 RAB29O14966 203 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 NKX2-8O15522 239 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 WNT2P09544 360 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 TCF15Q12870 199 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 DUX4L9Q6RFH8 374 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 REC114Q7Z4M0 266 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 PYGO2Q9BRQ0 406 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 PARD6AQ9NPB6 346 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 PCNX1Q96RV3 2341 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 SLC17A3O00476 420 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 SPINK4O60575 86 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 ACTL6BO94805 426 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 GCH1P30793 250 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 ACOT6Q3I5F7 207 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 CENPVQ7Z7K6 275 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 C9orf106Q8NAJ2 232 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 OR4A16Q8NH70 328 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 SGMS2Q8NHU3 365 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 TMEM170AQ8WVE7 144 aa11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 GMPPAQ96IJ6 420 aaPredicted RBP11.89□□□□□ -0.51
PCDHGA3-203ENST00000619750 PKDREJQ9NTG1 2253 aa11.88□□□□□ -0.51
PCDHGA3-203ENST00000619750 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms