RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 TPRA1Q86W33 373 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 FCGR1BQ92637 280 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 KCTD12Q96CX2 325 aaKnown RBP9.1□□□□□ -0.95
UPF3B-204ENST00000619445 HSD17B10Q99714 261 aaKnown RBP9.1□□□□□ -0.95
UPF3B-204ENST00000619445 DCUN1D5Q9BTE7 237 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 ZNF230Q9UIE0 474 aaPredicted RBP9.1□□□□□ -0.95
UPF3B-204ENST00000619445 RAB26Q9ULW5 256 aa9.1□□□□□ -0.95
UPF3B-204ENST00000619445 HUWE1Q7Z6Z7 4374 aaKnown RBP9.09□□□□□ -0.95
UPF3B-204ENST00000619445 TRBV9A0A0B4J1U6 114 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 DHFRP00374 187 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 HLA-DQB1P01920 261 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 MAS1LP35410 378 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 SCAND1P57086 179 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 RHOGP84095 191 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 PLA2G7Q13093 441 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 CDNFQ49AH0 187 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 IZUMO2Q6UXV1 221 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 IL34Q6ZMJ4 242 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 OR4S2Q8NH73 311 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 CNBD2Q96M20 576 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 ZNF257Q9Y2Q1 563 aa9.09□□□□□ -0.95
UPF3B-204ENST00000619445 LINC00473A8K010 186 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 ANKRD65E5RJM6 399 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 CSN3P07498 182 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 SAA1P0DJI8 122 aaPredicted RBP9.08□□□□□ -0.96
UPF3B-204ENST00000619445 KIR2DS2P43631 304 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 GNG2P59768 71 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 EXOSC2Q13868 293 aaKnown RBP9.08□□□□□ -0.96
UPF3B-204ENST00000619445 MSMO1Q15800 293 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 C22orf42Q6IC83 251 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 IL17DQ8TAD2 202 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 MAFIPQ8WZ33 124 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 C5orf30Q96GV9 206 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 ST6GALNAC5Q9BVH7 336 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 OR51E2Q9H255 320 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 Q9H521 79 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 ZNF430Q9H8G1 570 aaPredicted RBP9.08□□□□□ -0.96
UPF3B-204ENST00000619445 AKIP1Q9NQ31 210 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 SLC2A8Q9NY64 477 aa9.08□□□□□ -0.96
UPF3B-204ENST00000619445 RBMX2Q9Y388 322 aaKnown RBP9.08□□□□□ -0.96
UPF3B-204ENST00000619445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.07□□□□□ -0.96
UPF3B-204ENST00000619445 SHISA3A0PJX4 238 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 DPPA5A6NC42 116 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 FCGR3BO75015 233 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 TMEM127O75204 238 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 HRASP01112 189 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 MRGPRG-AS1Q2M3A8 158 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 UBE2UQ5VVX9 321 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 ZNF66Q6ZN08 573 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 IDO2Q6ZQW0 420 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 HAPLN4Q86UW8 402 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 OR2A7Q96R45 310 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 YTHDF1Q9BYJ9 559 aaKnown RBP9.07□□□□□ -0.96
UPF3B-204ENST00000619445 TECRQ9NZ01 308 aaKnown RBP9.07□□□□□ -0.96
UPF3B-204ENST00000619445 SSR3Q9UNL2 185 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 TENM2Q9NT68 2774 aa9.07□□□□□ -0.96
UPF3B-204ENST00000619445 A0A0A6YYH2 397 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 A6NJ64 397 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 NPIPB5A8MRT5 1133 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 GGCTO75223 188 aaKnown RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 TPPPO94811 219 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 SNRPBP14678 240 aaKnown RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 HIST1H1BP16401 226 aaKnown RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 MECP2P51608 486 aaKnown RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 ARPC4P59998 168 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 HAGHQ16775 308 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 C15orf32Q32M92 178 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 ZBTB34Q8NCN2 500 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 DYNLRB2Q8TF09 96 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 TCTEX1D2Q8WW35 142 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 BORCS5Q969J3 196 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 THAP7Q9BT49 309 aaPredicted RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 TXNL4BQ9NX01 149 aaKnown RBP9.06□□□□□ -0.96
UPF3B-204ENST00000619445 ANXA10Q9UJ72 324 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 ETV7Q9Y603 341 aa9.06□□□□□ -0.96
UPF3B-204ENST00000619445 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 LGALS9O00182 355 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 BMPR1BO00238 502 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 KBTBD11O94819 623 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 TRBV12-3P01733 135 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 APELAP0DMC3 54 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 NFYAP23511 347 aaPredicted RBP9.05□□□□□ -0.96
UPF3B-204ENST00000619445 PSMB9P28065 219 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 RPL27AP46776 148 aaKnown RBP9.05□□□□□ -0.96
UPF3B-204ENST00000619445 OR4A5Q8NH83 315 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 TMEM167AQ8TBQ9 72 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 DAPK2Q9UIK4 370 aa9.05□□□□□ -0.96
UPF3B-204ENST00000619445 LCE6AA0A183 80 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 TMEM235A6NFC5 223 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 CYB5BO43169 146 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
UPF3B-204ENST00000619445 FGF2P09038 288 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 ZNF45Q02386 682 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 FAM106AQ4KMX7 169 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 OR4A47Q6IF82 309 aa9.04□□□□□ -0.96
UPF3B-204ENST00000619445 SFXN4Q6P4A7 337 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms