RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 BLCAPP62952 87 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 Q6ZSV7 163 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 Q8N2B8 174 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 ADAD2Q8NCV1 583 aaKnown RBP15.65■□□□□ 0.1
UPF3A-211ENST00000618700 TP53RKQ96S44 253 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 NAA60Q9H7X0 242 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 ZNF702PQ9H963 129 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 PLEKHA2Q9HB19 425 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 COMMD9Q9P000 198 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 KIAA1456Q9P272 454 aa15.65■□□□□ 0.1
UPF3A-211ENST00000618700 C3orf85A0A1B0GTC6 90 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 SLC25A17O43808 307 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 S1PR2O95136 353 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 HPRT1P00492 218 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 CRYGBP07316 175 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 HKR1P10072 659 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 FBXL15Q9H469 300 aa15.64■□□□□ 0.09
UPF3A-211ENST00000618700 SH2D7A6NKC9 451 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-211ENST00000618700 B3GALNT1O75752 331 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 SAA1P0DJI8 122 aaPredicted RBP15.63■□□□□ 0.09
UPF3A-211ENST00000618700 RAG2P55895 527 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 TAS2R31P59538 309 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 UBE2KP61086 200 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 POU2AF1Q16633 256 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 MZT2BQ6NZ67 158 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 Q6ZS46 218 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 TMED4Q7Z7H5 227 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 CENPSQ8N2Z9 138 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 RASL11BQ9BPW5 248 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 PRSS22Q9GZN4 317 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 C16orf95Q9H693 158 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 TPSG1Q9NRR2 321 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 METTL1Q9UBP6 276 aaKnown RBP15.63■□□□□ 0.09
UPF3A-211ENST00000618700 FLVCR2Q9UPI3 526 aa15.63■□□□□ 0.09
UPF3A-211ENST00000618700 TEX13DA0A0J9YY54 714 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-211ENST00000618700 HLA-DRB1P01911 266 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 UCP1P25874 307 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 LPAR6P43657 344 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 SUPT4H1P63272 117 aaKnown RBP15.62■□□□□ 0.09
UPF3A-211ENST00000618700 VMA21Q3ZAQ7 101 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 LCE2AQ5TA79 106 aaPredicted RBP15.62■□□□□ 0.09
UPF3A-211ENST00000618700 GALNT14Q96FL9 552 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 SIGLEC9Q9Y336 463 aa15.62■□□□□ 0.09
UPF3A-211ENST00000618700 HRASP01112 189 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 IGKV1-39P01597 117 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 IGKV1D-39P04432 117 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 TCRBP04435 133 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 OR5AC1P0C628 307 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 NQO2P16083 231 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 AKR1C4P17516 323 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 DEFA1P59665 94 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 DEFA3P59666 94 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 DHODHQ02127 395 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 SP6Q3SY56 376 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 SLC25A42Q86VD7 318 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 SGPP2Q8IWX5 399 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 VKORC1L1Q8N0U8 176 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 PUSL1Q8N0Z8 303 aaKnown RBP15.61■□□□□ 0.09
UPF3A-211ENST00000618700 TEX45Q8NA69 505 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 RHOVQ96L33 236 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 HSPB9Q9BQS6 159 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 C20orf85Q9H1P6 137 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 PALMDQ9NP74 551 aa15.61■□□□□ 0.09
UPF3A-211ENST00000618700 FAM240BA0A1B0GVZ2 78 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 ARPC1BO15143 372 aaKnown RBP15.6■□□□□ 0.09
UPF3A-211ENST00000618700 IGHG2P01859 326 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 SERPINE2P07093 398 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 RPA2P15927 270 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 UBE2MP61081 183 aaKnown RBP15.6■□□□□ 0.09
UPF3A-211ENST00000618700 MRGPRG-AS1Q2M3A8 158 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 TMEM128Q5BJH2 165 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 OR4F5Q8NH21 305 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 LINC01006Q8NI28 216 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 GLYATL2Q8WU03 294 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 TMEM158Q8WZ71 300 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 R3HDM4Q96D70 268 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 AIFM2Q9BRQ8 373 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 C19orf24Q9BVV8 132 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 TMEM222Q9H0R3 208 aa15.6■□□□□ 0.09
UPF3A-211ENST00000618700 IGHV7-81A0A0B4J1V7 117 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 TMEM89A2RUT3 159 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 MARCH11A6NNE9 402 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 PLGLAQ15195 96 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 LCE2CQ5TA81 110 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 LIN54Q6MZP7 749 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 PPP1R27Q86WC6 154 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 VSTM2AQ8TAG5 236 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 NUDT15Q9NV35 164 aa15.59■□□□□ 0.09
UPF3A-211ENST00000618700 FCN1O00602 326 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 KBTBD11O94819 623 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 OR2A4O95047 310 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 IL6RP08887 468 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-211ENST00000618700 SSBP2P81877 361 aaPredicted RBP15.58■□□□□ 0.08
UPF3A-211ENST00000618700 NDPQ00604 133 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 PJVKQ0ZLH3 352 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 PPP1R1AQ13522 171 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 TMEM187Q14656 261 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 C9orf152Q5JTZ5 239 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 OR4A47Q6IF82 309 aa15.58■□□□□ 0.08
UPF3A-211ENST00000618700 SSX9Q7RTT3 188 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms