RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ANXA7P20073 488 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 TAS2R31P59538 309 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 RPL15P61313 204 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 DHODHQ02127 395 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 PLGLAQ15195 96 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 C5orf64Q2M2E5 130 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 VMA21Q3ZAQ7 101 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 C9orf152Q5JTZ5 239 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 Q6ZS46 218 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 GLYATL2Q8WU03 294 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 ZFAND2BQ8WV99 257 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 R3HDM4Q96D70 268 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 CLCC1Q96S66 551 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 BEX1Q9HBH7 125 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 FAM212BQ9NTI7 297 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 NUBP2Q9Y5Y2 271 aa12.41□□□□□ -0.42
PCDHGC3-204ENST00000617222 FCN1O00602 326 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 B3GALNT1O75752 331 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 KRASP01116 189 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 IGKV1-39P01597 117 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 IGKV1D-39P04432 117 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 CRYGBP07316 175 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 SAA1P0DJI8 122 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 NQO2P16083 231 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 VAMP1P23763 118 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 UCP1P25874 307 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 UBE2KP61086 200 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 SUPT4H1P63272 117 aaKnown RBP12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 RELBQ01201 579 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 PPP1R1AQ13522 171 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 TRIM16LQ309B1 348 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 LIN54Q6MZP7 749 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 Q6ZSV7 163 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 DUSP18Q8NEJ0 188 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 GALNT14Q96FL9 552 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 RHOVQ96L33 236 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 AIFM2Q9BRQ8 373 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 PRSS22Q9GZN4 317 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 TPSG1Q9NRR2 321 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 NUDT15Q9NV35 164 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 COMMD9Q9P000 198 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 SIGLEC9Q9Y336 463 aa12.4□□□□□ -0.42
PCDHGC3-204ENST00000617222 SFT2D2O95562 160 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 G6PCP35575 357 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 RAB25P57735 213 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 UBE2MP61081 183 aaKnown RBP12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 ERVK-16P61578 105 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM187Q14656 261 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM222Q9H0R3 208 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 PRR13Q9NZ81 148 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 ZFHX3Q15911 3703 aa12.39□□□□□ -0.43
PCDHGC3-204ENST00000617222 TSPAN9O75954 239 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR2A4O95047 310 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 CDS2O95674 445 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR4E1P0C645 316 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 ANXA3P12429 323 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 SPNP16150 400 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 POU2AF1Q16633 256 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR4A47Q6IF82 309 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 PLET1Q6UQ28 207 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 PPP1R27Q86WC6 154 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 ZNF695Q8IW36 515 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 SELENOHQ8IZQ5 122 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 PUSL1Q8N0Z8 303 aaKnown RBP12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 CASTOR1Q8WTX7 329 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR2A7Q96R45 310 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 RANBP3Q9H6Z4 567 aaPredicted RBP12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 ZNF702PQ9H963 129 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
PCDHGC3-204ENST00000617222 CUBNO60494 3623 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 C9orf170A2RU37 121 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 LINC01548A6NM66 108 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 NDUFA7O95182 113 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 HLA-DRB1P01911 266 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 HKR1P10072 659 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 RAG2P55895 527 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 PJVKQ0ZLH3 352 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 C4orf46Q504U0 113 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 ARSJQ5FYB0 599 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 LHFPL5Q8TAF8 219 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 VSTM2AQ8TAG5 236 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 SEC22AQ96IW7 307 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM56Q96MV1 263 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 HSPB9Q9BQS6 159 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 ALX4Q9H161 411 aaPredicted RBP12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM140Q9NV12 185 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM56-RWDD3S4R434 201 aa12.37□□□□□ -0.43
PCDHGC3-204ENST00000617222 IGHV7-81A0A0B4J1V7 117 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 TRAV3A0A0B4J244 114 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 INMT-MINDY4F8WBC2 141 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 ATG12O94817 140 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 CA2P00918 260 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 HLA-AP01891 365 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms