RNA–Protein interactions for RNA: ENST00000616010.4

CCND3-223, Transcript of cyclin D3, human

TSL 5 BASIC

Gene CCND3, Length 2,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-223	ENST00000616010	FLYWCH2	Q96CP2	140 aa	Known RBP	18.91	■□□□□ 0.62
CCND3-223	ENST00000616010	HARBI1	Q96MB7	349 aa		18.91	■□□□□ 0.62
CCND3-223	ENST00000616010		J3QLI3	93 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	SHOX	O15266	292 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010		P0C879	139 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	CYB5R2	Q6BCY4	276 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	OR4C13	Q8NGP0	309 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	NKX2-5	P52952	324 aa	Predicted RBP	18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	IL15RA	Q13261	267 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	CCDC144NL	Q6NUI1	221 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	BRD3OS	Q6XYD6	125 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	RHOV	Q96L33	236 aa		18.9	■□□□□ 0.62
CCND3-223	ENST00000616010	ABCA1	O95477	2261 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	TRAV14DV4	A0A0A6YYC5	116 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010		A0A1B0GU03	582 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	NXPH3	O95157	252 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	HRAS	P01112	189 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	EIF2B2	P49770	351 aa	Known RBP	18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	S100A10	P60903	97 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	RAB32	Q13637	225 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	SMCO1	Q147U7	214 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	TMEM177	Q53S58	311 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	OR4D5	Q8NGN0	318 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	OSR1	Q8TAX0	266 aa	Predicted RBP	18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	AJUBA	Q96IF1	538 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	TMEM140	Q9NV12	185 aa		18.89	■□□□□ 0.61
CCND3-223	ENST00000616010	OOSP1	A8MZH6	123 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	SLC25A6	P12236	298 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	NOXA1	Q86UR1	476 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	FOXRED2	Q8IWF2	684 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	OR1S1	Q8NH92	325 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	MALSU1	Q96EH3	234 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	FLNA	P21333	2647 aa	Known RBP	18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	SRRM4	A7MD48	611 aa	Known RBP	18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	MPC2	O95563	127 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	PSMB6	P28072	239 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	FGL1	Q08830	312 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	OR11H4	Q8NGC9	324 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	CFHR4	Q92496	578 aa		18.88	■□□□□ 0.61
CCND3-223	ENST00000616010	NOTCH2	Q04721	2471 aa		18.87	■□□□□ 0.61
CCND3-223	ENST00000616010	RPS16	P62249	146 aa	Known RBP	18.87	■□□□□ 0.61
CCND3-223	ENST00000616010	OR4A47	Q6IF82	309 aa		18.87	■□□□□ 0.61
CCND3-223	ENST00000616010	MS4A7	Q9GZW8	240 aa	Predicted RBP	18.87	■□□□□ 0.61
CCND3-223	ENST00000616010	MBP	P02686	304 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	OR9G9	P0C7N8	305 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	HABP2	Q14520	560 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	KLF17	Q5JT82	389 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	NSG2	Q9Y328	171 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	PITX3	O75364	302 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	VENTX	O95231	258 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	SAA1	P0DJI8	122 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	NKX2-1	P43699	371 aa	Predicted RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	POU2AF1	Q16633	256 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	GRPEL2	Q8TAA5	225 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	RITA1	Q96K30	269 aa		18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	LSM5	Q9Y4Y9	91 aa	Known RBP	18.86	■□□□□ 0.61
CCND3-223	ENST00000616010	FXYD6-FXYD2	A0A087WZ82	144 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	RBMXL2	O75526	392 aa	Known RBP	18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	OR2B8P	P59922	312 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	CXorf66	Q5JRM2	361 aa	Predicted RBP	18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	HYLS1	Q96M11	299 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	COA4	Q9NYJ1	87 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	MBD2	Q9UBB5	411 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	MYO9A	B2RTY4	2548 aa		18.85	■□□□□ 0.61
CCND3-223	ENST00000616010	CD24	P25063	80 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	CD1B	P29016	333 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	C11orf87	Q6NUJ2	197 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	AIFM2	Q9BRQ8	373 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	TRAV3	A0A0B4J244	114 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	IGKV1D-33	P01593	117 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	IGKV1-33	P01594	117 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	PET100	P0DJ07	73 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	ARHGDIB	P52566	201 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010	THAP6	Q8TBB0	222 aa		18.84	■□□□□ 0.61
CCND3-223	ENST00000616010		H0YIZ8	118 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010		K7EPK0	472 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010	IGLV2-23	P01705	113 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010	FAM71E2	Q8N5Q1	922 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010	MAGT1	Q9H0U3	335 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010	OR5AC2	Q9NZP5	309 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010	POMT1	Q9Y6A1	747 aa		18.83	■□□□□ 0.61
CCND3-223	ENST00000616010		A0A0U1RQK1	487 aa		18.83	■□□□□ 0.6
CCND3-223	ENST00000616010	FAM90A9P	A6NNJ1	464 aa		18.83	■□□□□ 0.6
CCND3-223	ENST00000616010	ST8SIA3	O43173	380 aa		18.83	■□□□□ 0.6
CCND3-223	ENST00000616010	OR4A16	Q8NH70	328 aa		18.83	■□□□□ 0.6
CCND3-223	ENST00000616010	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	18.83	■□□□□ 0.6
CCND3-223	ENST00000616010	SNRNP70	P08621	437 aa	Known RBP	18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	CNTFR	P26992	372 aa		18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	POLR2G	P62487	172 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	RELB	Q01201	579 aa		18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	HES1	Q14469	280 aa		18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	BET1L	Q9NYM9	111 aa		18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	RCL1	Q9Y2P8	373 aa	Known RBP	18.82	■□□□□ 0.6
CCND3-223	ENST00000616010	DEDD	O75618	318 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	LGALS7	P47929	136 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	FBLN7	Q53RD9	439 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	PRSS54	Q6PEW0	395 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	PUSL1	Q8N0Z8	303 aa	Known RBP	18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	RNF126	Q9BV68	326 aa		18.81	■□□□□ 0.6
CCND3-223	ENST00000616010	QTRT1	Q9BXR0	403 aa	Known RBP	18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms